Corynebacterium pelargi: CPELA_06810
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Entry
CPELA_06810 CDS
T05936
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpeg
Corynebacterium pelargi
Pathway
cpeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPELA_06810 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpeg03019
]
CPELA_06810 (deaD)
03009 Ribosome biogenesis [BR:
cpeg03009
]
CPELA_06810 (deaD)
Enzymes [BR:
cpeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CPELA_06810 (deaD)
Messenger RNA biogenesis [BR:
cpeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPELA_06810 (deaD)
Ribosome biogenesis [BR:
cpeg03009
]
Prokaryotic type
rRNA helicases
CPELA_06810 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
HEM4
Motif
Other DBs
NCBI-ProteinID:
QAU52624
UniProt:
A0A410W9J0
LinkDB
All DBs
Position
complement(1486127..1488136)
Genome browser
AA seq
669 aa
AA seq
DB search
MSITDNATGGENVPEENFVSESQDQSQGNAIQDVDGDKGANTSENNDSAAADNEKAAEAE
REQEGKKEAGFENLGLPKAVLKAVQKVGFEVPSAIQAQTIPLLMEGNDVMGLAQTGTGKT
AAFALPILSRIDAKKRHPQALVLAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGI
QLSGLRRGAQIIVGTPGRVIDHLEKGSLDISELKYLVLDEADEMLNMGFQEDVERILADT
PEEKQVALFSATMPNGIRRLSKQYMNDPREIQVKSETRTNTNITQRYLSVAHRNKLDALT
RILEVTEFEAMIMFVRTKHETEELAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLD
ILVATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRML
RSIERATNAPLTEMDLPTVDEVNDSRKAKFADSITESLEDDQVAVFRGLIKQYAEEHDVP
LEDIAAALATQARAGDEFLMKEAPPERRRDRRDRDFDRRDRGDRRGRDFDRGERRDRGDR
GSRFERSQDMQLYRLAVGKRQHVRPGSIVGALANEGGLSNKDFGRISIFADHTLVELPKN
MSRDVLDNLRDTRISGQLINIERDNGRPPRDNRGGFRGERDDRRGGRGGFRGNRGDRDDR
RGGRGRWRD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgagaacgtgccggaagagaattttgtgtcg
gaatctcaggatcaatcgcaaggaaacgccatccaagatgttgatggcgacaagggcgcg
aatacttctgagaacaacgactccgctgcagcggacaatgagaaagccgctgaagcggaa
cgtgagcaagagggtaaaaaagaagccgggtttgaaaacctgggcttgccaaaggccgta
ttaaaggccgtgcaaaaggttggctttgaggttccctcagccatccaggcgcagaccatc
ccgttgctgatggaaggcaacgacgtcatgggtctggcccaaacgggtacaggtaaaact
gccgcatttgccttgccaattctttcgcgtatcgacgcaaagaagcgccacccacaggca
ctggtgctggcaccaacccgcgaattggcactccaagtggccgattcattccaaagcttt
gccgatcacctgggcgatatccacgtcctgcccatctacggtggccaggcctacggcatt
cagctttctggtcttcgccgcggcgcgcagatcatcgtgggtactcccggtcgtgtgatc
gaccacctggaaaagggctcactggatatctccgagctgaagtacctcgtcttggatgag
gcagacgagatgctcaacatgggcttccaagaagacgtggagcgcatcctcgccgatact
ccagaagaaaagcaggtggccctgttttctgccaccatgcccaacggtattcgccgtttg
agcaagcagtacatgaacgacccgcgtgaaattcaggtcaagagcgagactcgcaccaac
accaacatcacgcagcgctacctttctgtggcgcaccgcaacaaactcgatgctttgacc
cgcatcctcgaagtgaccgagtttgaagccatgatcatgttcgtgcgcaccaagcacgag
actgaagagctcgcagaaaagctccgtgcccgcggattctccgctgccgccatcaatggc
gatattgcacaggcgcagcgtgagcgcaccgtggaccagctcaaagacggccgcctcgac
atcctcgtggccaccgacgttgctgctcgtggtttggacgttgaacgcatcacccacgtc
tttaactacgacatccccaacgacaccgaaagctatgtgcaccgcattggtcgcacggga
cgcgctggccgctccggcgaggcaatcctgtttgttaccccgcgtgaacgccgcatgctg
cgctcgattgagcgcgccaccaatgcgcctttgaccgagatggatctgcccaccgtcgat
gaggtgaatgattcgcgtaaggcgaagttcgccgattcgatcaccgagtcgctcgaagac
gatcaggtggcagtattccgcggtctgatcaagcaatacgccgaagaacacgatgttcct
ttggaagacattgccgcagcactggccacccaggctcgtgcaggtgatgagttcttgatg
aaggaggctccgccggagcgtcgccgtgatcgccgcgatcgtgactttgatcgccgtgac
cgtggggatcgtcgtggccgcgacttcgaccgtggtgagcgccgtgatcgtggcgaccgt
ggcagccgttttgagcgcagccaggatatgcagctctatcgcctcgccgtgggtaagcgc
caacatgtgcgccccggttccatcgttggcgccctggccaacgagggcggcttgagcaac
aaggacttcggtcgaatcagcatctttgcagaccacaccctggtggaactgccgaagaac
atgtcgcgcgatgtgcttgacaacctgcgtgataccaggatctctggccagttgatcaac
atcgagcgcgataatggtcgccctccgcgcgataaccgcggtggcttcaggggcgagcgt
gatgatcgtcgtggtggacgcggtggcttccgcggtaaccgtggtgatcgcgatgaccgc
cgtggcggtcgtggccgctggcgcgactag
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