Cucurbita pepo subsp. pepo (vegetable marrow): 111781713
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Entry
111781713 CDS
T05351
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00520
Amino sugar and nucleotide sugar metabolism
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
111781713
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
111781713
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
111781713
NCBI-ProteinID:
XP_023518169
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Position
LG19:complement(7574220..7576960)
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AA seq
721 aa
AA seq
DB search
MTLSEKVAQLGNDAPGVARLGLPPYNWWSEALHGISNVGPGTRFDNVVPGATSFPNVINM
AASFNEAMWKTVGQAVSTEGRAMYNLGRAGLTYWSPTINVVRDPRWGRTLETPGEDPFVV
GKYAANYVRGLQDVEGTENATDLNSRPLKVSSCCKHFAAYDVDNWKGVHRFTYDARVTEQ
DMLETFLKPFEMCVKEGDVSSVMCSYNRVNGYPTCADPVLLKDTIRGDWDLHGYIVADCD
SVEVMVKHQHFLNDTNEDAVAQTLKAGLDLDCGVLSPKYAESSVRQGKVRVKNIDKALNY
LYVVLMRLGFFDGSPKFQSLGSKDICNDEHIELATEAARQGIVLLKNDNDALPLDPAIIK
TLAVVGPHANATYVMLGNYAGVPCRMKSPIDGLSEYAKVNYQMGCENANCKIDTFIPGAV
DAAKNSDATVIVVGLDLSIEAEDVDRVDLLLPGLQTQLIEQVAAASKGPVVLVIMSAGGI
DISFAKNISNIKAIVWAGYPGEEGGRAIADVIFGKYNPGGRLPVTWHEADYVNQLPMTSM
PLRPVPSLKYPGRTYKFFDGPVVYPFGYGLSYTSFNHTLVSAIPSVTVNINKAILCRDIA
YDTALKLDCASILVDDITCSDDFEFEIKVENVGKKDGSQVVIVYSKPPSGISSTHIKQVV
GFQRVFLKAGGFQSVKFKLNACKSLGLIDFGGYNLLPAGEHTILVGDGAVSFPVKLSFNG
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacattgtctgagaaagttgctcaacttggcaacgatgcccctggagtagcccgcctc
ggtttaccaccgtacaattggtggtcagaggctcttcatggcatctccaatgttggccct
ggtactcgatttgacaatgttgtgccaggcgccactagcttccccaatgtcatcaacatg
gcagcatctttcaatgaagctatgtggaaaacagtcggtcaagcggtttcgaccgaagga
agagcaatgtacaatctagggagggctggattgacatattggagtccaaccatcaatgta
gttcgagatccaagatggggacgaaccttggaaacacctggcgaggacccttttgtggtt
ggcaaatatgcagcgaactatgttagaggtctccaagatgtggaaggaactgaaaatgcc
accgatttgaactctaggcctctcaaagtttcttcttgttgcaagcactttgctgcttat
gatgtcgacaattggaaaggtgtccatcgcttcacttatgatgctagggtgactgaacaa
gacatgttggagacattccttaagccatttgagatgtgtgttaaggaaggtgatgtcagc
agtgtgatgtgttcttacaacagagttaatggctatccaacttgtgctgatccagttctc
ttgaaggacaccattagaggcgattgggaccttcatggatacattgttgcagactgtgac
tcagttgaggttatggttaaacatcaacatttcctgaatgatacaaatgaagatgctgtt
gctcaaactctgaaagcagggttggatttggattgtggtgtactttccccgaaatacgca
gaaagctcagtaaggcaagggaaagttagagtgaaaaacattgacaaagctctaaactat
ctctacgttgttctaatgagacttggattcttcgatggaagccccaagttccaatcgctt
ggaagcaaagatatttgcaatgatgaacacattgaattggcaactgaagctgccagacaa
ggaattgttcttctcaagaacgataatgacgctttgcctcttgatcctgctattatcaaa
accctggctgttgttggaccccatgccaatgccacttatgtcatgcttggcaactatgca
ggagtgccatgccgaatgaaatctccaattgatgggctatcagaatatgcaaaagtgaac
taccaaatgggttgtgagaatgcaaattgcaaaatagatacgttcatacctggagcagta
gatgcggccaagaactcggatgcaactgtgattgttgtgggtcttgatttgtccattgaa
gctgaggacgtggacagagttgatcttcttcttcctggtctccaaactcagctcatcgaa
caagttgcagctgcctctaagggccctgttgttcttgtcatcatgtcagccggtggcatc
gacatctcttttgctaaaaatatttccaacatcaaagccattgtctgggctggttatccc
ggcgaagagggcggccgcgccatcgccgatgttatctttggaaaatacaacccaggagga
agattaccggtgacatggcatgaagccgactacgtcaaccagctaccaatgacatcgatg
ccgctccgcccagtgccaagcctcaaatatccaggaagaacctacaaattcttcgacggc
cctgtcgtctaccccttcggctacggcctcagctacacctctttcaaccatactctagtc
tccgccatcccatccgtgaccgtcaatatcaacaaagcaatcctatgccgagacattgcc
tacgacactgccttaaagctagactgtgcctccatcctcgtcgacgacataacttgctcc
gacgatttcgagttcgaaatcaaagtcgagaatgtcggcaaaaaggacggtagccaggtt
gtgatcgtgtactcgaaaccaccaagcggaatttcatcaactcatatcaagcaggtggtt
gggttccagagggtgtttttgaaggctgggggcttccaatcggtgaaatttaagttgaat
gcttgtaagagcttggggctaattgatttcggtggctacaatctgctgccggcgggtgag
cacaccattttggtgggagatggcgcggtttctttccctgtgaagcttagcttcaatggg
gtttaa
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