Cucurbita pepo subsp. pepo (vegetable marrow): 111783457
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Entry
111783457 CDS
T05351
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111783457
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111783457
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
T4SS_TraI
Motif
Other DBs
NCBI-GeneID:
111783457
NCBI-ProteinID:
XP_023520154
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Position
LG20:1966052..1967684
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AA seq
381 aa
AA seq
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MASSSSHLLLTLLIIISLIQSSHQDYYTPTKNNMNIIDSCWRSSSNWAKNRQALANCAVG
YGKDAIGGKFGTIYVVTDPSDNPSNPKYGTLRYGVIQNKPLWVVFAKSMVIVLKNELMIN
SFKTIDGRGANVEIAYGPCITVQGVSHVIIHGISIHDCKPAKAGLVRDTVTHVGKRRGSD
GDAISIFASSHVWIDHCYLAQSTDGLIDIIHASTAVTVSNNYFSQHDKVMLLGHNDGFTD
DKIMRVTIVFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSEGNYFV
APKNSNAKQVTKREVNKGWNNWKWRSSRDVFLNGAYFVQSGWGSCSPFYTRAQSFPVAPG
SKVPALTANSGPLRCSIGKRC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcatcatcccaccttcttctaactcttctcatcattatctcactcatacaa
tcctcccatcaagattactacaccccaaccaagaacaacatgaacataatcgactcttgt
tggcgttcatcctccaattgggccaaaaaccgccaagccttagccaactgcgcggtgggc
tacggcaaggacgcaattggaggcaaatttggcaccatttacgtagtcaccgacccatct
gacaacccttcaaaccccaaatatggaacgttgcgttatggtgtgattcaaaacaagcca
ctttgggttgtgtttgctaagagcatggttattgtgttgaagaatgagctgatgataaat
agtttcaagaccattgatggacgtggtgctaatgtggagattgcttatgggccttgcatt
acggtgcaaggggttagccatgttattatacatggaattagtatccatgattgtaagcct
gccaaagctgggcttgttagagacactgtcacacatgttggcaaacgtagaggctctgat
ggtgatgccatttctatatttgcttcctcccatgtttggattgatcattgttacttagct
caatccactgatggtcttattgatataattcatgcttccaccgctgttactgtctcaaat
aactacttctcccaacatgacaaggtgatgctgcttggacataacgatgggttcaccgat
gataaaattatgagggtcaccattgtcttcaaccgcttcggagctggccttatcgagagg
atgccgagggttaggttcggttacgcccacgtagccaacaatcgatacgacgagtggaaa
atgtacgcgataggtgggagtgcaaaccccacaatcttcagtgaagggaactacttcgta
gctcccaagaactcaaatgccaaacaggtaacaaagagagaggtcaacaaagggtggaat
aactggaaatggagatcctcaagagacgtgttcttgaacggcgcttactttgtgcaatct
gggtggggaagttgcagcccattctacacaagagctcagtcctttccagtggctccaggc
tccaaggttccagctttgactgcaaattctgggccacttcgttgctccattggcaaacgt
tgctga
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