Cucurbita pepo subsp. pepo (vegetable marrow): 111798420
Help
Entry
111798420 CDS
T05351
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111798420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111798420
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111798420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
111798420
NCBI-ProteinID:
XP_023537311
LinkDB
All DBs
Position
LG07:5959979..5983894
Genome browser
AA seq
736 aa
AA seq
DB search
MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDSGMRRCGLNIDGFNRAVHGNDKPSGSF
KRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKKKIFDPQDKLLLFLNKLFVISCFLA
ISVDPLFFYVPVINQQSSCLGIDRKLAITVTTLRTVIDVFYLIHMALQFRTAYIAPSSRV
FGRGELVIDPAQIAKRYLRRYFIIDLVSVLPLPQIVVWRFLQRSKGSDVYVTKQALLFIV
FLQYIPRFLRALPLTSELKRTTGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAVERND
TCWQKYCSAPCRKNFLYCGNQDMEGFSTWNQTGVDALMSRCKPADDNDSFDFGIFKQALS
SGIAASKNFVGKYCYCLWWGLQNLSTLGQGLQTSTYPAEVIFSIALAVLGLILFALLIGN
MQTYLQSLTIRLEEMRVKKRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLVQ
TLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEYTYIVREGDPVDE
MLFIIRGRLESVTTDGGRSGFFNRTFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAI
TEVEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTM
ELRQKEEVAAEESETSQTTTTTSGGGSYSIRATFLASKFAANALRGVQRYRNAKSAQELI
KLQKPPEPDFSADDAD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggttacaagtcacaactgatgggtggtcagcgagaaaaattcgtgagg
ttggatgacttggactctagattgtcatcgccttctgatagtgggatgagaagatgtggt
ttgaatatagatggatttaaccgtgcagtccatggaaatgataaaccatctggatccttt
aagagaggaatgagaaaagggtccgaaggacttaaatcaattggtcgatcactcaagttt
ggagtatctcgagctgtatttccagaggatcttaaagagtcaaagaagaagatctttgat
cctcaagacaaattgctcttattcttgaataaactttttgtcatatcatgttttttagca
atatcggtggacccgctattcttttatgttcctgtcattaaccaacagtcgagctgtctt
ggcattgataggaagctggcaattacagtgacaacattgcgaacagttattgatgttttc
tatcttattcatatggctcttcaattccggacagcttatattgctccatcatctcgggtg
ttcgggagaggtgaacttgtgattgatcctgcacaaatagcaaaaagatacttgcggcgg
tatttcatcattgatttggtgtctgtgctgccccttccacagattgtggtctggagattt
cttcagaggtccaaaggttcagatgtatatgtgacaaaacaggcccttcttttcattgta
ttccttcaatatatcccaagatttcttagagcgttaccattgacttcagaattgaaaagg
acaacaggcgtatttgcagaaacagcctgggcaggtgctgcatattatttgctattatat
atgcttgcaagtcatatagttggagcactgtggtacttattagctgtggaacgcaatgac
acatgttggcagaagtattgtagtgccccttgcaggaaaaatttcttatattgcggtaac
caagacatggagggcttttcgacttggaaccagacaggtgtggatgccctaatgtcgaga
tgcaaacctgctgatgataatgattcgtttgattttggaatctttaaacaggctttgtcc
tctggcattgcggcatccaaaaattttgtcggcaaatattgttactgtctatggtggggc
ctacaaaacttaagtacgcttgggcaggggcttcaaacaagcacttatccggctgaagtg
atcttttctatagcattggctgtacttggtctcatcctctttgcacttcttattggcaac
atgcagacttatcttcaatctctcaccataaggcttgaggaaatgagggtgaaaaagcgt
gattcagagcaatggatgcatcatcgtttactgccacaggaacttcgggagagagtgagg
cgatatgatcagtacaagtggttggagacccgcggagtcgacgaacagagtttggttcaa
actctccctaaggatcttaggagagatattaagcgacatctttgtctcgctttagtaaga
agggttcctctgtttgaaagcatggatgagaggctgcttgatgctatttgtgagcggcta
aaaccgtgtttgtttacagagtacacgtacatagtccgtgagggtgatccagtcgatgag
atgcttttcattatacgtggtcgactcgagagtgtgactaccgatggtgggcgaagcgga
tttttcaatcgtaccttcctgaaagaaggtgatttttgtggtgaagagcttttgacttgg
gctcttgacccgaaatctggttcgaatcttccatcttcgacaaggacggtaaaggctatt
acagaggttgaggctttcgccctcgtcgctgaagagttgaaattcgtggccagtcagttc
aggcgccttcacagtagacaggtgcaacatacgtttcgattctactcgcaacaatggagg
acatgggctgcttgcttcatccaagcggcatggcgtcgatactccaagagaaagactatg
gaacttcgtcaaaaggaagaagttgcggcggaggaatccgagacatctcaaacgacgacg
accacaagcggaggaggctcttacagtattcgtgcaactttcctagcttctaaatttgct
gccaatgctctccgaggcgttcagcgatatcgcaacgcaaagagcgctcaggagttgata
aaattgcagaagcctcccgagccagattttagcgcggatgatgccgattga
DBGET
integrated database retrieval system
