Cucurbita pepo subsp. pepo (vegetable marrow): 111810363
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Entry
111810363 CDS
T05351
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111810363
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111810363
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
111810363
NCBI-ProteinID:
XP_023552838
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Position
LG14:1120911..1122809
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AA seq
397 aa
AA seq
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MKLLFAVIFLFYVTVLRSLTVSALSYFNVLDYGATGNGKTDDSEAFLKAWNDACAVIEDN
PTLRVPFGKTYLLKPLKFQGPCKSKQVNFDLGGALMAPSKDEWPSDGEDKWVQFYNIDSL
TVQGDGRFNGQGSSWWNKDCHNHCNRPTALFFHNCNGLRLSKMKHINSGKNHISINDCNN
VVISDIHISAPEQSPNTDGIDISQSKNVLIQNSLIATGDDCIAINNGSSNINIVGITCGP
GHGISIGSLGKDGDYNVVENIYVRNCHLKDTQNGVRIKTWEGGYGYARNITFEKIILENT
KNPIIIDQYYSAFAYARKNMGREIKVSNVTYREVHGTSANENAIILNCSRARCTNIIMNN
VNIRTSTPDTEAKSVCQNADGRAISVIPPVPCLSKSH
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttctttttgctgtaatttttctattttatgttactgttttaagatcgttgact
gtatcagctttgtcttacttcaatgttcttgattatggagccactggaaatggcaaaaca
gatgactcggaagcttttttgaaagcttggaacgacgcgtgtgcagtaatagaagacaac
ccaactttacgtgtaccatttggaaaaacttacctgttgaaacctctcaaattccagggc
ccttgcaagtccaaacaagtcaattttgaccttggaggagctctaatggctccaagcaag
gatgaatggcccagtgatggtgaagataaatgggtccaattttacaacatagattctctc
actgtccaaggagatggtcgatttaatggccaaggttcttcatggtggaacaaagattgt
cataatcactgcaaccgaccaacggcattatttttccacaactgtaacgggcttcgtctt
agtaaaatgaagcacattaatagtggcaagaatcatatttccataaatgattgcaataat
gtcgttatctcagatattcacattagtgctcccgagcagagtcctaatacagatggaatt
gacatttcccaatcaaaaaatgttcttattcaaaattctttaatagctacaggtgatgat
tgtattgctattaataacggatcttcaaatatcaatatagtaggcatcacttgtggcccc
ggtcatggcataagcattgggagcttaggaaaggacggtgattataatgttgttgaaaat
atctacgtgagaaattgccacttaaaagacactcaaaatggagttagaatcaagacttgg
gagggtggatatggatatgcaagaaacatcacgttcgagaaaataatactcgaaaataca
aaaaacccaattattatcgatcaatattactcagcttttgcatacgcaaggaaaaatatg
ggaagggaaataaaagtgagcaatgtgacatatcgtgaagttcatggaacatcagcaaat
gaaaatgcaattatattgaattgttctcgagctcgttgcacaaacattattatgaataat
gtgaacataaggacatcaactcccgatacagaagccaaatctgtttgtcaaaatgctgat
ggaagagctatatctgtcattccacccgtaccttgtttatcaaaatctcattaa
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