Clostridium perfringens ATCC 13124: CPF_2037
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Entry
CPF_2037 CDS
T00378
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CPF_2037 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpf03016
]
CPF_2037 (trmU)
Enzymes [BR:
cpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
CPF_2037 (trmU)
Transfer RNA biogenesis [BR:
cpf03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
CPF_2037 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
Arginosuc_synth
QueC
Asn_synthase
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABG84972
UniProt:
Q0TPH2
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All DBs
Position
complement(2277896..2278975)
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AA seq
359 aa
AA seq
DB search
MTKKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDA
RRVAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPCIACNKYLKFDELLQKAKGI
GADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKIR
EIAKEIGLDVHNKKDSEEICFIPDNNHGRYICEAAPNKVRPGNFVDKYGNVLGKHKGIVY
YTIGQRKGLGLALGRPVFVTDINPVTNTVVVGPEEDIFKTDLVCKDINFISIDKLEGPME
VEAKIRYSARPAKATISPMENGRVKVSFEDKQRAITKGQSVVFYKDDLVVGGGIIESLL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagaaaaaggttgttataggtatgagcggcggagttgatagctccgttgctgct
taccttttaaaggaacagggatacgatgtaattggtgttacaatgcaaatatggcaagag
gataaggaatatgaggaaagagaaggtggatgttgttcactgtcagcagtggatgatgct
agaagagttgctcaaaaactagatattcctttttacgttttaaactttagagatagtttt
aaaagaaatgtaatagattattttgtagacgaatatatacaaggtagaactccaaatcca
tgtattgcatgtaacaaatatcttaaatttgatgagcttttacaaaaagctaaaggtata
ggtgcagactatgttgcaacaggtcactatgctaaaattgaagaaagagatggaagattc
caacttataagatcaaaggatgatagaaaagatcaaacttatgctttatacaatctaact
caagaacagttagagcatactttaatgccttgtggagaattcactaaggataagattaga
gaaatagctaaagagatcggtctagatgtacataataaaaaggacagtgaagaaatatgc
tttattccagataataatcatggaagatacatatgtgaagctgctccaaacaaagttaga
ccaggaaactttgtcgataagtatggaaatgtcttaggaaaacataaaggaatagtctat
tatacaataggacaaagaaagggcttaggattagctcttggaagaccagtgtttgttact
gatataaaccctgtaactaatactgttgtagtaggaccagaagaggatatctttaaaact
gatttagtttgtaaagatataaatttcatatctatagataaacttgaaggccctatggaa
gttgaagctaaaattagatattcagctagaccagctaaggctactataagtcctatggaa
aatggaagagttaaagtttcttttgaagataagcaaagagctataactaaaggtcaatct
gttgttttctataaagatgatttagttgtaggtggaggaataatcgaaagcctactttaa
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