Clostridium perfringens ATCC 13124: CPF_2376
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Entry
CPF_2376 CDS
T00378
Symbol
dacF
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00550
Peptidoglycan biosynthesis
cpf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPF_2376 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpf01002
]
CPF_2376 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpf01011
]
CPF_2376 (dacF)
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CPF_2376 (dacF)
Peptidases and inhibitors [BR:
cpf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CPF_2376 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
cpf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CPF_2376 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Transpeptidase
DUF5305
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
ABG84467
UniProt:
A0A0H2YV11
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All DBs
Position
2647093..2648427
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AA seq
444 aa
AA seq
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MSIKFKNLKIKLNFIISMAFIFSLILSTNVFAESNVPEIKGEGMVLMDGTTGEVLAEKNA
NEKLAPASTTKTMTALLTVEKANLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALL
IQSANDAAVALAEHISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLAL
IMNVASKNPIIDEITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYT
TKSRHTFTCAAKRGDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKE
YYIDDKNTLSLVVPEDIYKTFKNSEIENLSTDEIKKNLNIDFSVKATKPISRGTDILKDT
DSFTGTLMIGNTPYKTLNLLNSNDITYTSFEKLMFKLKGFSGFYIALGVIGLIFLIILIL
FMIRLISTIKRIRNRKKRNSYFYN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaagtttaagaatttaaaaataaaacttaattttataatatctatggctttt
atcttctctttaattttaagtactaatgtttttgctgaaagtaatgtaccggaaattaaa
ggtgaaggaatggttcttatggatgggactacaggggaggttttagctgaaaaaaatgct
aatgaaaaacttgctcctgcatctactactaaaactatgacagctttacttacagtagaa
aaagctaacttaaatgatgttgttactataggaaagaatcctcctttagctgaaggaacc
cgtgttggtcttcaagaaggagataaatatacagttgaagaattgcttaatgcattatta
atacaatcagctaatgatgctgctgtagctttagctgaacatatttctggctctgaagaa
aagtttgcaaagcttatgaatgagcgtgcagaagaattaggagctaaaaatactcacttt
gttaatgctagtggactttttgaggatgatcatatgactaccccttatgatctagctcta
ataatgaatgtagcttcaaaaaatccaataattgatgaaattacaaaaaaaacagtttat
gaaatgcctaaaagcattgtaagtggagaacctatatgggcaaataataataatcaactt
attcaccaaacaagcccatattataataaagatattttttgtaacaaaacaggatataca
actaaatcaaggcatacatttacttgtgcagctaaaaggggtgatagaaaattaatcctt
accctactaggttatgacactaaggatcaatactatgaagatacaaaaaatcttttagat
tatggctttgataatttttctttagttaaattatattctaaaaatgatgttgtaaaagaa
tattacattgatgataagaacaccttatctttagtagttcctgaagatatttataaaaca
tttaagaactctgaaatagagaacttatctacagatgaaataaagaaaaatttaaacata
gacttttcagtaaaagcaactaaacctatatctaggggtactgacatattaaaagatact
gattcttttactggaacacttatgattggaaatactccttataaaaccttaaatctttta
aatagtaatgatataacttatacaagttttgaaaaacttatgtttaaattaaagggtttt
agtggattttacatagctttaggtgttataggtttaatatttttaataatcttaatacta
tttatgattagacttatatcaactataaaaagaataagaaatagaaaaaaacgtaattca
tatttttataattaa
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