Clostridium perfringens ATCC 13124: CPF_2552
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Entry
CPF_2552 CDS
T00378
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPF_2552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpf02000
]
CPF_2552
Transporters [BR:
cpf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CPF_2552
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
NACHT
TniB
AAA_16
AAA_7
AAA_22
ATP-synt_ab
RNA_helicase
AAA_5
nSTAND3
ResIII
AAA_25
Sigma54_activat
Alg14
ATPase
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
ABG84183
UniProt:
A0A0H2YT22
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All DBs
Position
complement(2811903..2812880)
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AA seq
325 aa
AA seq
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MGKTLVEFKNLETHFHTGEGIVKAVNNVSFKIKEGETVCVVGESGCGKSVTAMSLMRLIP
SPPGKIVGGEILFEGKDVLKFTEQELMDMRGNDISVIFQEPMTSLNPVFKIGDQICEAII
LHQHLSKEEAEKKAIEVLKIIGIARAEEIMKSYPHELSGGMRQRIMIAMAVCCNPKLLIA
DEPTTALDVTIQAQILDLMRDIKEKLNTSILLITHDLGVVAEMADYVVVMYAGKVIEEAP
VLELFKNPLHPYTQGLLKSKPSVNGNETRLYSIPGQVPNPVGMPDNCYFNERCDRCMEKC
KDVQPTLVDVGNRHKVSCWLYKEGK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaacattagtagaatttaaaaatcttgaaactcactttcatacaggtgaggga
attgttaaagcagtaaataacgttagttttaaaataaaagaaggggagacagtttgtgta
gttggagaatctggatgcggaaaatctgttactgccatgtctcttatgagattaatacca
agtcctcctggaaaaatagttggaggagaaattctttttgagggaaaagatgttttaaag
ttcacagagcaagaacttatggatatgagaggaaatgatatatcagttattttccaagaa
cctatgacatcattaaacccagtatttaaaataggagatcaaatttgtgaagcaataatt
cttcatcagcatttatcaaaagaagaagctgaaaagaaagctatagaagttttaaaaata
attggtatagctagagcagaagaaataatgaaatcttatcctcacgaattatcaggagga
atgagacaaagaattatgattgctatggcagtttgttgtaatcctaagcttttaatagct
gacgagcctacaactgcccttgatgttacaattcaagcacaaattctagatcttatgaga
gatattaaagagaaattaaatacatcaatattattaataacacatgacttaggagtagtt
gctgaaatggctgactatgttgttgtaatgtatgctggtaaggttattgaggaagctcca
gttttagagctttttaaaaatcctcttcatccatatacacaaggtttacttaaatctaag
ccatcagttaatggaaatgaaactagactttattcaataccaggacaagttcctaatccg
gtaggtatgccagataattgctacttcaatgagagatgtgatagatgtatggaaaaatgt
aaggatgttcaacctactcttgttgatgtaggaaatagacataaagtttcatgctggtta
tataaggagggaaagtag
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