KEGG   Clostridium perfringens ATCC 13124: CPF_2552
Entry
CPF_2552          CDS       T00378                                 
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
cpf  Clostridium perfringens ATCC 13124
Pathway
cpf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cpf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CPF_2552
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cpf02000]
    CPF_2552
Transporters [BR:cpf02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    CPF_2552
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N NACHT TniB AAA_16 AAA_7 AAA_22 ATP-synt_ab RNA_helicase AAA_5 nSTAND3 ResIII AAA_25 Sigma54_activat Alg14 ATPase ABC_ATPase
Other DBs
NCBI-ProteinID: ABG84183
UniProt: A0A0H2YT22
LinkDB
Position
complement(2811903..2812880)
AA seq 325 aa
MGKTLVEFKNLETHFHTGEGIVKAVNNVSFKIKEGETVCVVGESGCGKSVTAMSLMRLIP
SPPGKIVGGEILFEGKDVLKFTEQELMDMRGNDISVIFQEPMTSLNPVFKIGDQICEAII
LHQHLSKEEAEKKAIEVLKIIGIARAEEIMKSYPHELSGGMRQRIMIAMAVCCNPKLLIA
DEPTTALDVTIQAQILDLMRDIKEKLNTSILLITHDLGVVAEMADYVVVMYAGKVIEEAP
VLELFKNPLHPYTQGLLKSKPSVNGNETRLYSIPGQVPNPVGMPDNCYFNERCDRCMEKC
KDVQPTLVDVGNRHKVSCWLYKEGK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggaaaaacattagtagaatttaaaaatcttgaaactcactttcatacaggtgaggga
attgttaaagcagtaaataacgttagttttaaaataaaagaaggggagacagtttgtgta
gttggagaatctggatgcggaaaatctgttactgccatgtctcttatgagattaatacca
agtcctcctggaaaaatagttggaggagaaattctttttgagggaaaagatgttttaaag
ttcacagagcaagaacttatggatatgagaggaaatgatatatcagttattttccaagaa
cctatgacatcattaaacccagtatttaaaataggagatcaaatttgtgaagcaataatt
cttcatcagcatttatcaaaagaagaagctgaaaagaaagctatagaagttttaaaaata
attggtatagctagagcagaagaaataatgaaatcttatcctcacgaattatcaggagga
atgagacaaagaattatgattgctatggcagtttgttgtaatcctaagcttttaatagct
gacgagcctacaactgcccttgatgttacaattcaagcacaaattctagatcttatgaga
gatattaaagagaaattaaatacatcaatattattaataacacatgacttaggagtagtt
gctgaaatggctgactatgttgttgtaatgtatgctggtaaggttattgaggaagctcca
gttttagagctttttaaaaatcctcttcatccatatacacaaggtttacttaaatctaag
ccatcagttaatggaaatgaaactagactttattcaataccaggacaagttcctaatccg
gtaggtatgccagataattgctacttcaatgagagatgtgatagatgtatggaaaaatgt
aaggatgttcaacctactcttgttgatgtaggaaatagacataaagtttcatgctggtta
tataaggagggaaagtag

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