Corynebacterium pseudotuberculosis 316: CP316_01260
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Entry
CP316_01260 CDS
T01753
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cpg
Corynebacterium pseudotuberculosis 316
Pathway
cpg00521
Streptomycin biosynthesis
cpg00523
Polyketide sugar unit biosynthesis
cpg00541
O-Antigen nucleotide sugar biosynthesis
cpg01100
Metabolic pathways
cpg01110
Biosynthesis of secondary metabolites
cpg01250
Biosynthesis of nucleotide sugars
Module
cpg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cpg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CP316_01260 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CP316_01260 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CP316_01260 (rfbD)
Enzymes [BR:
cpg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CP316_01260 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CP316_01260 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
AP_endonuc_2
DHquinase_II
Motif
Other DBs
NCBI-ProteinID:
AFB71574
LinkDB
All DBs
Position
complement(256845..258227)
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AA seq
460 aa
AA seq
DB search
MNIETCPIQDMMVIHLDLHEDSRGWFKENWQEAKLAGLGFTGFRPVQNNISFNVEAGVTR
GLHAEPWDKYVSVATGSVFGAWCDLREGSATFGATFTITITPETAVFVPRGVANGFQALE
ATAYTYLVNDHWAPDAHYSFVNLADPALNISWPIPLDQATLSKKDTAHPPLASAVPVPPK
KVLVTGANGQLGRALKKVFPHAEFCSRTDLDITTDITEARRWADYSVIINAAAYTAVDAA
ETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDGELPVHSEQEPFSPLNVYGQS
KAAGDTAVSVAPQHYVVRTSWVVGEGNNFVSTMFSLAARGISPQVVNDQLGRLTFTEDLA
AGIRFLLDNHAPYGVYNLSNSGEIVSWAQLAQRVFTLAGRSASDVQPVSTTEYFAGKAPA
APRPRHSALDLGKITGLGFTPRDWQDALASYCTTLDAKEG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagaaacctgccctatccaggacatgatggtcatccatctcgacctgcatgag
gactctcgcggctggttcaaagaaaattggcaagaggccaagcttgccggcttaggattc
accggtttccgaccagtgcaaaacaatatttcctttaatgttgaggccggagtaacccgc
ggtttacacgcagaaccatgggataaatacgtctccgtagcaaccggctcggtctttggc
gcctggtgcgatttacgcgaagggtccgcaacgtttggcgccacatttaccatcaccatt
acccctgagaccgctgtctttgttccgcggggggtggccaacggattccaggctcttgag
gctaccgcatacacctatttagtcaacgaccactgggcaccagacgctcattattctttt
gtcaatcttgctgatcctgcattaaacatttcttggccgatccccctcgatcaagcgacc
ctttccaagaaagacacggcgcaccctccgctagcatcagcggtacccgtaccacccaag
aaagtactggttaccggggcaaacgggcagcttggcagggctctaaaaaaggtcttcccc
catgccgagttctgctctcgcaccgacttagacatcactacagacattacagaggcgcgt
cgctgggctgactacagcgtaattatcaacgccgcggcctacacagctgtcgacgccgct
gaaactgattcaactgctgcttggcgtaccaacgcggaagctcctgctcgccttgccgcg
attgctgctcgatacgggatcacgctggtgcatctctctagcgactatgtctttgacggc
gaactccctgttcacagtgaacaagaacccttcagcccgctgaacgtctatgggcagtcg
aaagctgctggcgatactgcagtaagcgttgccccacagcattatgtagtgcgcaccagc
tgggtggtgggcgaagggaataactttgtatccacgatgttctcccttgccgcacgcggg
atctctccccaggtggtaaacgatcagctaggcaggctcacctttactgaggacctggcc
gcaggtatccgatttttgctcgataaccatgccccttatggggtgtataacctcagcaat
tctggggagattgtgtcctgggcgcaactagcacaacgggtatttacgctggcggggcgt
tcagcttccgacgttcaaccagtaagcacaaccgagtattttgcaggaaaagcacccgct
gccccgcgtccccgccactcagccttggacttgggtaaaatcacgggactcggattcacc
ccacgtgattggcaggatgcactcgcgagctactgcaccacactggatgcaaaggaaggc
taa
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