Chrysemys picta (western painted turtle): 101941018
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Entry
101941018 CDS
T04662
Symbol
AGRN
Name
(RefSeq) agrin isoform X3
KO
K06254
agrin
Organism
cpic
Chrysemys picta (western painted turtle)
Pathway
cpic04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101941018 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpic00535
]
101941018 (AGRN)
Proteoglycans [BR:
cpic00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101941018 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
EGF
SEA
CFAI_KAZAL
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
101941018
NCBI-ProteinID:
XP_008165492
UniProt:
A0A8C3IF58
LinkDB
All DBs
Position
24:complement(3086500..3304184)
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AA seq
2063 aa
AA seq
DB search
MSRFGFFCAAMGGRRSGAAGLSAWALALLAVGLGGCSGSCPERELERREEEANVVLTGTV
EEIMNMDPVHHTYSCKVRVWRYLKGKDIVTHKILLDGGNKVVISGFGDPLICDNQVSTGD
TRIFFVNPAPHYLWPEHKNELMLNSSLMRITLRNLEEVEHCVEVCRGMLCGFGAICERST
TNSSQASCVCKKTTCPVVVAPVCGSDYSTYSNECELEKAQCNQQRRIKVISKGACGSKDP
CAEVTCSFGSTCARSTDGQSAKCICPASCGGAAESTVCGSDGKDYRSECLLNKHACDKQE
NVFKKLDGPCDPCRSTLNDMNRVCRVNPRTRRADLLSRPENCPPKRDPVCGDDGVTYDNE
CVMGRSGAIRGLEIQKVRSGNCQPQDKCQAECKFNAVCLNRRGTARCSCDRIACDGAYRP
VCARDSRTYSNDCERQKAECQQKAAIPVKHEGPCDLGMPSPCLSVECTFGATCVVKNREA
VCECQQVCLSRYDPVCGSDNRTYGNPCELDAMACVLRKEIKVKHKGPCDRCSKCQFGAIC
EAETGRCVCPTECVSSSQPVCGTDGNTYGSECELHVRACTQQTNIQVAAQGDCKSCGSAV
CAFGSKCVGGQCVCPRCERQPFSQVCGSDGVTYDSPCELQVASCQQKKAIEVSRTGPCEE
ECGSGGSGSGDDNECEQDRCRQYGGSWDEDVEDDRCVCDFTCLAVPRNPVCGSDGATYAN
ECELKKTRCEKRQDLYVTSQGACRVIGTPPPPLLVLHCSQTIYGCCPDNTTVALGVGSAG
CPSTCQCYPYGSYGGACDPTTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCH
CDPVGSVRDDCEQMTGLCSCKTGITGMKCNQCPNGSKLGMTGCEKDPSAPKSCRELSCEF
GASCVEVSGFAHCECPSPLCVEANMTKVCGSDGVTYGDQCQLKTIACRQGQVIKVKHVGQ
CHESITHVSHTVQPMPLPTLPLDKLLHPPPLRLTTPAPNPTETATSSLLFEARPIPRSQP
ATVRVTTARPATTPWTTQGIRRTTIRPLSTAPVVLATPPPAYSESGSAEGSGDPELGISG
DQEASGAGSAGEEEPEESQVTSTPAIERATCYNSPLGCCSDGKTAAVDTEGSNCPATKVF
QGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRNSDVKKDFKSIRVRDL
GQSSAVRVIVESHFDPATSYTAADVQRALLKQIKASKKRPILVKKPQQDHIKFMDFDWIP
RLFTTTTTTTTATTMAPITTRRFTAPTAAHVLPPEAMERPSTKMAGPATTRRPTATVPAT
TRRKPTRLPPATKKPARPCDSHPCLHGGTCEDDGKEFTCSCPAGKGGAVCEKSIRYFIPG
FGGKSYLAFKMMKAYHTVRIAMEFRASELSGLLLYNGQNQGKDFISLALVNSFVELRFNT
GSGTGVITSKVPVEPGKWHQLVVNRNRRNGMLSVDGEPHVNGESPSGTDGLNLDTDLFVG
GVPEDQMAVVADRTSATAGLKGCIRLLDVNNQMYDLREKGSDVLYGSGVGECGNNPCHPN
PCHHGAICHVKEAEMFHCQCLNGYTGPTCADERNPCDPSPCHVSATCLVLPEGGAKCECP
MGREGEFCEAVTEQDQTRPFLPEFNGFSYLELRGLQTFGRELQDKMSMEVVFLARNPSGM
IFYNGQKTDGKGDFISLALHDGYLEYRYDLGKGAAVLKSKEPVPLNTWNSVSLERNGRKG
VMRINNGERVMGESPKSRKVPHTSLNLKEPLYVGGAPDFSKLARAAAISTSFDGAVQRIS
IKGIPVLKEENIHSAIEISAFRSHPCSQKPNPCQNGGMCTPRLESYECACQRGFSGARCE
KVIIEKAAGDSEAIAFDGKTYLEYHNAVTKSPEALDYAPDRSEKALQENHFELSIKTEAT
QGLILWSGKGLERSDYIALAVVDGYVQMTYDLGSKPVVLRSTVPVNTNQWIQIKAYRVHR
DGSLQVGNEAPITGSSPLGATQLDTDGALWLGGIEKLSLAHKLPKAYSTGFIGCIRDVIV
DRQELHLVEDALNNQTILHCSAK
NT seq
6192 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcttcggtttcttttgtgcggcgatggggggaaggcggagcggggctgcgggg
ctctccgcctgggcgctggcgctgctggccgtggggctggggggctgctcgggcagctgt
cccgagagggagttggagaggagagaggaggaggcgaacgtggtgctgacgggcacggtg
gaggagatcatgaacatggacccggttcatcacacttactcctgcaaggtgagagtctgg
cggtacctaaaaggcaaagacatcgtgacgcacaaaatcctcttggacggtgggaacaaa
gtggtaatcagcggctttggggatcccttaatttgcgacaaccaggtctcgacgggggac
acccgcattttcttcgtcaacccagccccccactacctgtggcccgaacacaagaacgag
ttgatgctgaattccagcctgatgcggattaccctgcgcaacctggaagaggtggaacac
tgcgtggaagtgtgccgaggaatgctgtgcggattcggagccatatgcgagaggagcacc
accaactcctcccaggcctcctgtgtctgcaagaagactacctgcccggtggtggtggcc
cccgtctgtggctcggactattccacctacagcaacgagtgcgagctggagaaagcccag
tgcaaccagcagaggcggatcaaagtcatcagcaagggggcatgtggttccaaggacccc
tgcgcagaggtgacgtgcagcttcggcagcacctgcgcccgctccacggacggccagtcg
gccaagtgcatctgcccggcctcgtgcggcggcgcggccgagagcacagtgtgcggcagc
gatggcaaggactaccgcagcgagtgcctgctcaacaagcacgcctgcgacaagcaggag
aacgtcttcaagaagttggacgggccctgcgacccttgcaggagcactctcaatgacatg
aaccgggtgtgccgggtaaacccccgcactcgcagagcagacctgctctcccggcctgaa
aactgccctccgaaaagggaccctgtgtgtggcgacgacggggtgacttacgacaacgag
tgcgtcatggggcggtcgggcgccatccgggggctggagatccagaaggtgcgttcgggg
aactgccagcctcaggacaagtgccaggccgagtgcaagttcaacgccgtgtgcctcaac
cgccgcggcaccgcccgctgctcctgcgaccgcattgcctgcgacggcgcctaccggccc
gtctgtgccagggacagccggacctacagcaacgactgcgagcgccagaaggcggagtgc
cagcagaaagccgccatccccgtgaagcacgagggcccttgtgacctgggcatgcccagc
ccgtgcctgagtgtggagtgcaccttcggggccacctgcgtggtgaagaaccgggaggcg
gtgtgcgagtgccagcaggtatgcctcagccgctacgaccccgtgtgcggcagcgacaac
cgcacctacggcaacccctgcgagctggacgccatggcctgcgtcctcaggaaggagatc
aaagtgaagcacaaagggccttgcgaccggtgtagcaagtgtcagttcggtgccatctgc
gaggcggagacgggcaggtgcgtgtgcccaacagaatgcgtctcctcctcccagccggtc
tgcggcacggacgggaacacctacggcagcgagtgcgagctccacgtccgggcgtgcacg
cagcagaccaacatccaggtggccgcgcaaggagactgcaagtcgtgcggcagcgccgtc
tgtgccttcgggagcaagtgcgtgggcgggcagtgcgtgtgcccgcgctgcgagaggcag
cccttctcccaggtgtgtggcagcgacggcgtcacctacgacagcccgtgcgagctgcag
gtggcttcctgccagcagaagaaggccatcgaggtttccaggacgggaccttgtgaggag
gaatgtggttcagggggctcaggctccggggatgataacgagtgcgaacaggaccgctgc
cggcagtatgggggctcgtgggacgaggacgtggaggacgaccgctgcgtgtgtgacttc
acctgcctggccgtgccacgcaacccggtgtgcggctctgacggtgcgacctatgccaac
gagtgtgagctcaagaagacacgctgcgagaaacgccaggacctctacgtcaccagccaa
ggagcctgccgcgttattggaacgcctcccccgccgctcctggttctgcactgcagccag
accatctatggatgttgtccagacaatacaaccgtggccctcggcgtgggctcagctggc
tgcccaagcacctgtcagtgttacccctacggctcgtatgggggggcctgcgaccccacc
accggccagtgctcctgcaagccgggggtggggggcctgaagtgcgaccgctgtgaaccc
ggcttctggaacttccgcgggatagtcacggacagcaagagcggctgcaccccttgtcac
tgcgacccggtgggctcggtgcgtgacgactgtgagcagatgaccggactgtgctcgtgc
aagacgggcatcaccggcatgaaatgcaaccagtgccccaacggaagcaagctggggatg
acgggctgcgagaaagatccctccgcgccaaagtcctgccgcgagctgagctgcgagttc
ggggcgtcgtgcgtggaggtcagtggctttgcccactgcgagtgcccgtccccgctgtgc
gtggaggccaacatgaccaaggtctgtggctctgacggagtgacctacggtgaccagtgc
cagctgaagaccattgcatgccggcaggggcaggtcatcaaggtgaagcatgttgggcag
tgccatgaatccatcacccacgtgagtcacaccgtacagcccatgccactgcccacgctg
cccctggacaagctcctccaccccccgcctctaaggcttaccaccccggcccccaacccc
acggagacagccaccagttccctgctgttcgaagccaggcccattcctagaagccagcct
gccactgtacgggtgaccaccgcccggccggcgaccaccccctggaccacccaggggatc
cgcaggaccaccatccgccccctctccaccgctcctgtggtcctggccacccccccacct
gcgtactcggagtctggcagtgcagaaggcagcggggacccagaactgggcatcagtggg
gaccaggaagccagcggggctggctctgccggggaagaggagccagaggagagccaagtg
acatccacccccgccattgaacgagcgacgtgttataactcccctctgggatgctgctcg
gatggcaagacggcagctgttgacacagaaggaagcaactgcccggccaccaaggtcttc
cagggagtcctcatcttggaggaggtggagggccaggagctgttctacacgcccgagatg
gctgaccccaaatcggagctctttggggaaacggcgaggagcattgagagcgcgctggac
gagcttttccggaactccgacgtgaagaaggatttcaagagcatccgcgtgcgagacctg
ggccagagcagcgcggtccgcgtcatcgtggagtcccactttgacccagccacctcctac
acagcggcggacgtgcagagggccctgctcaagcagatcaaggcctccaagaagaggccc
atcctcgtgaagaagcctcagcaggaccacatcaaattcatggactttgactggattccc
aggcttttcaccaccacgaccaccaccaccactgccaccaccatggcacctatcaccacc
cggaggtttaccgcccccaccgctgcccacgtcctgcccccggaggccatggagaggccc
agcaccaagatggcagggcccgccaccaccaggagacccaccgccaccgtgccggccacg
acccggaggaagcccacgcgcctgccccctgccaccaagaagccggcccggccctgtgac
tcccacccctgcctgcacggcggcacctgcgaagacgacgggaaggagttcacctgcagc
tgccctgcggggaaagggggcgcggtctgcgagaaatccatcaggtacttcatccccggc
ttcggcgggaagtcctacctggccttcaagatgatgaaggcctaccacacggtgcgcatc
gccatggagttccgggcctccgagctcagcgggctgctgctctacaatgggcagaaccag
ggcaaggacttcatctccctggcgctggtcaacagcttcgtggagctcaggttcaacaca
gggtctggtacaggcgtcatcaccagcaaggtgcccgtggagcctggcaagtggcaccag
ctggtggtgaaccggaaccgccgcaatggcatgctgtcggtggacggggagccccacgtg
aacggggagagcccgagcggtaccgacgggctgaaccttgatacagatctgttcgtcgga
ggggtgccggaagaccagatggctgtggtggcagatcgcacgtcagccaccgccggcctg
aagggctgcatccgcctgctggacgtgaacaaccagatgtacgacctgcgggagaagggc
agcgacgtgctgtacggcagtggggtgggcgagtgcgggaacaacccctgccaccccaac
ccctgccaccacggcgccatctgccacgtcaaggaagccgagatgttccactgccagtgt
ctcaacggctacacgggtccgacctgtgccgatgagaggaatccgtgtgaccccagcccg
tgccacgtctctgccacctgcctggtgctgcccgagggaggcgccaagtgcgagtgcccc
atggggcgggaaggggagttctgcgaggcagtgacggagcaggaccagacccggccgttc
ctcccggagttcaacggcttctcctacctggagctgagagggctgcagacctttgggcgt
gagctgcaggacaagatgtccatggaggtcgtgttcctggccaggaaccccagcggcatg
atcttctacaacgggcagaagacggacggcaaaggggactttatctctctggccttgcac
gatggctacctggagtatagatacgacctgggcaagggggcagctgtgctcaagagcaag
gagccagtccctctgaacacctggaatagtgtgtcactggagaggaacgggcgcaagggg
gtgatgcggattaacaacggcgagagggtgatgggagagtcaccgaaatcccgtaaggtt
cctcacacctccctgaatctgaaggagcccctctacgtggggggagcgcccgacttcagc
aagctggcgcgcgccgcggccatctccaccagctttgacggagccgtgcagaggatctcc
attaagggcatcccggtcctgaaggaagagaacatccacagcgccattgagatctctgcc
ttccgctcccacccctgctcccagaaacccaacccctgccagaacggaggcatgtgcacc
ccccggctagagagctacgagtgcgcctgccagaggggcttctctggggcacgctgcgag
aaagtgatcatcgagaaggcagcgggagattcggaggccattgcctttgatggcaagacc
tacctggagtaccacaatgctgtgacaaagagtcccgaagcgctggactatgccccggat
cgcagcgagaaggccttgcaggagaaccactttgaactgagcatcaagacggaagccacc
cagggtctgatcctgtggagcgggaaggggctggagcggtcggactacatcgccctggcc
gtagtggatggttatgtgcagatgacctatgaccttggctccaagccagttgtcctgcgt
tccacggtgccagtgaacacgaaccagtggattcaaatcaaagcgtacagagtacacaga
gacggctccttgcaggttggcaacgaagcccccataactggttcttcccctcttggagca
actcagctagacaccgacggagccctttggctggggggaatagagaagctcagcctggct
cacaaactgcccaaggcctacagcaccggctttattggctgcataagggacgtgatagtc
gaccgccaagaactgcatctggtggaggacgctttaaacaaccagacgatattacactgc
tcagccaaataa
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