KEGG   Chrysemys picta (western painted turtle): 101941149
Entry
101941149         CDS       T04662                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X2
  KO
K10755  replication factor C subunit 2/4
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03030  DNA replication
cpic03410  Base excision repair
cpic03420  Nucleotide excision repair
cpic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101941149 (RFC2)
   03410 Base excision repair
    101941149 (RFC2)
   03420 Nucleotide excision repair
    101941149 (RFC2)
   03430 Mismatch repair
    101941149 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpic03032]
    101941149 (RFC2)
   03036 Chromosome and associated proteins [BR:cpic03036]
    101941149 (RFC2)
   03400 DNA repair and recombination proteins [BR:cpic03400]
    101941149 (RFC2)
DNA replication proteins [BR:cpic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101941149 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101941149 (RFC2)
Chromosome and associated proteins [BR:cpic03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101941149 (RFC2)
DNA repair and recombination proteins [BR:cpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101941149 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101941149 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Viral_helicase1 AAA_24 Mg_chelatase AAA_11 Rad17 RuvB_N AAA_assoc_2 AAA_18 AAA_19 nSTAND3 MipZ Gp44_lid AAA_5 AAA_28 AAA_25 AAA_23 AAA_30 T2SSE DNA_pol3_delta NTPase_1 ABC_tran MeaB RNA_helicase SLFN-g3_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 101941149
NCBI-ProteinID: XP_005284433
LinkDB
Position
Unknown
AA seq 353 aa
MEVEMAEAERPGPRDGEKRGAADAPAASGSGHYELPWVEKYRPMKLSEIVGNEDTVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLTDAQILARLMKIVERENVQYTDDGLEAIIFTAQGDMRQALNNLQSTYS
GFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWRLGYSPEDIVGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTAAPAES
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggaagtggagatggcggaggccgagaggcctgggccgcgggacggggagaagcgggga
gcggccgacgcccctgcggcctccggcagcggccactacgagctgccctgggttgaaaaa
tacagacctatgaagctatctgaaatagttgggaatgaagacactgtgagcagactggag
gtttttgcaagggagggaaatgtaccaaatattataattgctggtcctccaggaactggt
aaaacaaccagtatcttatgtttggctcgtgcactgcttggtcctgcattaaaggatgct
gttctggaactgaatgcttcaaatgacaggggcattgatgttgtgagaaacaaaatcaaa
atgtttgctcagcagaaggtcacacttcccaaaggtcggcataagataatcatcctggat
gaagcagacagcatgaccgatggagcacagcaagcattgcgaagaacaatggaaatttat
tccaaaacaactcgctttgcacttgcatgcaatgcctcagataaaatcatagagccaatc
cagtctcgctgtgctgtgctgcgctacaccaagctgacagatgctcagatccttgcaagg
ttaatgaaaattgttgagagagagaatgtacaatacacagatgatggactggaagccatt
atcttcacagcacaaggagatatgagacaggcattaaacaacttgcagtccacatattct
ggatttggctttattaacagtgagaatgtatttaaggtgtgtgatgagccacaccctctg
ctagtgaaggaaatgatacagcactgtgtgaatgcaaatattgatgaagcatacaagatt
cttgcccacttgtggcggcttgggtactcaccagaagatatagttggcaatatcttcaga
gtgtgtaaaaccttccaaatgccagagtatttgaaattggagttcatcaaggaaattgga
tatactcacatgaaggtagcagaaggggtgaattctctcttgcagatggctggactgctt
gccaggctctgtcagaagacggctgctcctgcagaaagttaa

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