KEGG   Chrysemys picta (western painted turtle): 101953077Help
Entry
101953077         CDS       T04662                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101953077 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpic03400]
    101953077 (LIG4)
Enzymes [BR:cpic01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101953077 (LIG4)
DNA repair and recombination proteins [BR:cpic03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101953077 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV DNA_ligase_A_C BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme Ribosomal_S5_C RTT107_BRCT_5 Peptidase_M4
Motif
Other DBs
NCBI-GeneID: 101953077
NCBI-ProteinID: XP_005305050
LinkDB All DBs
Position
Un
AA seq 914 aa AA seqDB search
MSSTPTSQSSPKRTVASVVPFADLCSILERIQKCKSRPEKIKYFKEFLDSWRKFHDALHK
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTP
TGSHGDAGDFAMIAYFVLKPRCPKQGRLTIQQVNELLDSVASNNAAKRKDLVKKSLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTVFSLFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSIMLFSAFKPMLAAIANVQQIEKQMNHQSFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYYTQQFGASPLEGSLTPFIHNVFKNSIQNCILDGEMMAYNPNTQTFMQKGSKFDIKKM
ADDSDLQTCFCVFDVLMVNDQKLGHEILSKRYEILNELFTPITGRIHIVHKTQASTRKEV
VDALNEAIDNREEGIMIKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIIGGYWGKG
LRGGMMSHFLCAVAETSPPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKHWKPYRKRDP
PCNILCGTEKPEVYIEPCNSVIVQIKAAEIVTSDMYKTDCTLRFPRIEKIREDKEWHECM
TLDFLEQLRGKASGKLASKHLDMGDDEPQEKKRKTVPKVKKIIGIMDNFKAPDLSNVNKI
SNIFENVEFCVMTGTENHSKSELESKVAESGGNVVQNPGPDTYCVIAGIENVRVKNIISS
NKHDVVRAEWLLQCFEMKIFVPWQPAFMIHMSPDTKQHFACEYDRYGDSYTADTDVTQLK
EVFSRINNKNDEKMPLDMIADLEERYLWNSSPLGMFRQNTIYLDLYAVVNDPSTKTHGTM
LSIRALELRFHGAKIVSQLKEGVSHVIMGEDHTHVKEIKALRRTFEKKFKILSELWVTDS
IKEGKLQNENPYLI
NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt
atgtcttccacacctacttctcaatcttcccctaaacgaactgtggcatcagtagttcct
tttgcagatctgtgttcaattttagaacgaatacagaaatgtaaatcccggccagagaaa
atcaagtattttaaggaatttttagattcatggaggaaatttcatgatgctcttcataaa
aaagagaaagatgtcacagactctttttatccagcaatgcgacttattcttccacaactg
gaaagagagagaatggcttatggaattaaagaaaccatgcttgctaagctctatattgaa
ctgctcaatttacccaaagaaggaaaagatgccctaaaactcttaaattatagaacacct
actggctcacatggagatgctggagactttgcaatgattgcctattttgtattgaaaccg
aggtgcccaaaacaaggcagactgaccatacaacaggtgaatgagctgctggattcagtt
gctagtaataatgctgccaaaaggaaggacctagtaaagaaaagtcttcttcagttaata
actcagagctcagcacttgaacagaagtggctgatccggatgattataaaggatctaaaa
cttggtgttagtcagcaaaccgtattttcccttttccatcctgatgctgctgagttacac
aatgtcacaactgacctggagaaagtttgcagacaactgcatgacccttctgtatcactc
agtgatgtttctatcatgttgttttctgcctttaaacctatgcttgctgctattgctaat
gtccagcaaattgagaaacaaatgaaccaccaaagtttttacatagaaactaaactagat
ggtgaacgtatgcagatgcacaaagatggagatgtatacaagtatttctcccgtaatggg
tttgattattatactcagcagtttggtgcttctcccctcgaaggttcattaactccgttt
attcataatgtgtttaaaaatagtatacaaaactgcattcttgatggtgaaatgatggcc
tacaatcccaatacacaaacttttatgcagaagggaagcaaatttgacataaaaaaaatg
gcagatgattctgatctgcagacatgcttttgtgtgtttgatgtattaatggttaatgat
cagaagttgggtcatgagatactaagcaaaagatatgagattctaaatgagctgtttaca
ccaataacaggcagaatacatatagttcataaaacacaggctagcaccaggaaagaagta
gttgatgctctaaatgaagcaatagataaccgagaagaaggaatcatgataaaagatcct
atgtccatttacaagccagacaaacgtggggaaggctggttaaaaatcaaaccagagtat
gtcaatggtctcatggatgaactagacctattaattattggtggttactggggaaaaggt
ttgcgtggtggcatgatgtctcattttttgtgtgctgttgctgagacttcccctcctggt
gaaaaaccatctgtctttcattctatttgtcgtgttggttctggttacactatgaaggag
ctatatgatcttggtttgaaattggccaaacactggaaaccttaccgtaaaagagatcct
ccttgtaatattttatgtggaactgagaagcctgaagtctacatcgagccttgtaactca
gtcatagttcagattaaggcagcggagattgttactagtgatatgtacaaaactgattgc
actttgcgattccctcgaattgagaaaataagagaggacaaagagtggcatgaatgtatg
actttggatttcttagaacagctcagaggtaaagcatcagggaagctagcatctaagcac
cttgatatgggtgatgatgaaccacaagaaaagaaacggaaaactgtaccaaaggttaag
aaaataattggaatcatggataattttaaagcccctgatctttccaatgtaaataagatt
tctaatatatttgaaaatgttgagttttgtgttatgactggaacagaaaaccattcaaaa
tctgaactggaaagtaaagtagcagaaagtggtggtaatgtggtacaaaaccctggacca
gacacttactgtgttattgcaggaattgagaatgtcagagtaaaaaatataatatcttcc
aacaagcatgatgttgtgagagcagagtggcttttacagtgttttgaaatgaaaatattt
gtaccatggcagcctgccttcatgattcacatgtctccagatacaaaacaacattttgca
tgtgaatacgatcgttatggtgacagctacacagcagatacagatgtgacccaactaaag
gaagtattctcaagaattaataataaaaatgatgagaagatgcctttggacatgattgct
gacttagaagaacgttatttgtggaatagctctccactcggtatgttcaggcaaaatacc
atttatctggacctttatgctgttgttaatgaccccagtaccaagacccatggaacaatg
ctatcaattagagctttggagctccgttttcatggagcaaaaatagtctcacagctaaag
gagggtgtatcccatgtaattatgggagaagatcatacccatgtgaaagagataaaagca
cttaggagaacatttgagaaaaaatttaaaatcctatctgagctgtgggtaacagattca
ataaaggaggggaagttacagaatgaaaatccatacctaatttaa

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