Citrobacter portucalensis: FOB25_20880
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Entry
FOB25_20880 CDS
T06238
Symbol
sdiA
Name
(GenBank) transcriptional regulator SdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
cpot
Citrobacter portucalensis
Pathway
cpot02020
Two-component system
cpot02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FOB25_20880 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FOB25_20880 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpot03000
]
FOB25_20880 (sdiA)
Transcription factors [BR:
cpot03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FOB25_20880 (sdiA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
HTH_20
Sigma70_r4
CD4-extracel
Motif
Other DBs
NCBI-ProteinID:
QET58744
LinkDB
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Position
4386130..4386852
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AA seq
240 aa
AA seq
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MQDHDFFTWRRSMLLRFQEMATAEDVYTELQQQTQHLEFDFYALCVRHPVPFTRPKTSLH
TTYPKAWVAHYQSENYFAIDPVLKPENFSQGHLPWNDTLFRDAQPLWDAARNHGLRKGMT
QCLMLPNRALGFLSVSRASIRNSRLASDEVELRMQLLVRESLSVLTRLEDDMVMAPEMRF
SKREKEILKWTAEGKTSSEIAIILSISENTVNFHQKNMQKKFNAPNKTQIACYAAATGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatcatgatttcttcacctggcgacggagcatgctgttacgctttcaggaaatg
gcgacggcagaggatgtctatacggaattacaacaacagacgcagcacttagagttcgat
ttttacgcgctctgtgttcgtcatccggtaccttttacccgacctaaaacgtctcttcat
acgacctatcccaaagcatgggtggcgcattatcagtccgaaaattatttcgccattgat
ccggtgctgaaacctgaaaacttcagtcaggggcatttaccctggaacgatactctgttt
cgcgatgcgcaacctttgtgggacgccgcacgcaatcacggtttacgcaaagggatgacg
caatgcttaatgttgcctaatcgggcgttgggttttttatctgtatcgcgtgcaagtatt
cgtaacagtcgccttgcgagcgatgaagtggagctcaggatgcagcttctggtgcgggaa
agcctgtctgtactgacgcggctggaagatgacatggttatggcgccagaaatgcgcttt
agcaagcgggaaaaggaaatattgaaatggacggcggaggggaagacctcttcagagata
gccatcattctgtctatttctgaaaataccgtgaacttccaccagaagaatatgcaaaag
aaattcaatgcaccaaacaaaacgcagatagcctgctatgccgcggcaaccgggcttatc
tga
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