Collimonas pratensis: CPter91_3049
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Entry
CPter91_3049 CDS
T04306
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPter91_3049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_3049
Enzymes [BR:
cpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CPter91_3049
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPter91_3049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
DUF4473
Motif
Other DBs
NCBI-ProteinID:
AMP05387
UniProt:
A0A127Q5T1
LinkDB
All DBs
Position
complement(3140672..3141301)
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AA seq
209 aa
AA seq
DB search
MPSYWEDAKNELMKRDRIMRKLIPQFGDLHLVGRGEAFTTLARSVVGQQITVKAAEQVWQ
KFLLVCPKTTPAQVLKAGPEQLAACGLSKRKADYILDLADHFKAKRVDAEQWQEMEDEAV
IADLTQIRGIGRWTAEMFLIFNLLRPNILPLDDPGLLKGISVNYFSGEPVSRSDAREVSA
NWEPWRTVATWYLWRSLDPVSTEYQVTTE
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcgtattgggaagatgcaaagaacgagttgatgaagcgtgaccgtatcatgcgt
aaattgattccacagtttggcgatctgcacctggtcggacgcggcgaagcgtttaccacg
ctggcgcgctcagtggtcgggcagcagattacggtaaaggcggccgagcaggtatggcag
aagttcctgctggtctgtcccaagacgaccccggcccaggtattgaaagcaggccccgag
caactggcggcttgcggtttgtccaaacgtaaagcagactatattctcgacctggccgat
catttcaaggcaaaacgggtcgacgccgagcaatggcaggagatggaagacgaagccgtg
attgcggacctgacgcagatccgcggcatcggacgctggacagcggagatgtttttgata
tttaatttgctccggcccaatatcttgcccctggatgacccggggttgcttaaaggcatt
agtgtcaattatttttcgggcgagcccgtttcgcgcagcgatgcgcgcgaagtatcggcc
aattgggagccctggcgtactgtggcaacatggtatttatggcgtagtctggatccggta
tcgacagaatatcaagtcactactgagtaa
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