KEGG   Collimonas pratensis: CPter91_4543Help
Entry
CPter91_4543      CDS       T04306                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
cpra  Collimonas pratensis
Pathway
cpra00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:cpra00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CPter91_4543 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:cpra01002]
    CPter91_4543 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpra01011]
    CPter91_4543 (dacB)
Enzymes [BR:cpra01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     CPter91_4543 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     CPter91_4543 (dacB)
Peptidases [BR:cpra01002]
 Serine Peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   CPter91_4543 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:cpra01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   CPter91_4543 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Peptidase_S11
Motif
Other DBs
NCBI-ProteinID: AMP06849
UniProt: A0A127Q9W0
LinkDB All DBs
Position
complement(4684202..4685683)
Genome map
AA seq 493 aa AA seqDB search
MRGIILRNLSFSAGVHLKKILALSLLLSFLFLSSLLPASVQAQESSLPPTFSKALQVAGI
PVQSVGVYVQEVDGTGQVLASSNAAMPFNPASTMKLVTTDAALELLGPTYRWKTQAYASG
SQVGNVLQGDLIFKGNGDPKLVLENFWLFLRQIRAKGIRDIRGNIVLDRSAFDQNAYDPS
EFDGDPMKPYNVGPDALLLNYKTLTFQFVPDADKRQVSVVLDPPMSGYPVRPPRLGQGSC
DDWQGKLQAVVETDGASFNGALPASCGEKTWYVNPYKMNSTQYFGAVFRQMWSDLGGSFS
GGVKDGLTPPDARLVAEWSSVTLPEVIRDINKYSNNVMARQVLLTIAADILKLPATPERG
ARAIQSWLAGKGIDASGLVIENGSGLSRNEKISAKTMGRMMAAAFQSPTMPEFVSSMPLV
GYDGTMRKRLKDQSVAGQAHVKTGTLNDVRAIAGYVLAASGKYYAVVCLINHPNAPRGQA
AQDGLLQWVYENG
NT seq 1482 nt NT seq  +upstreamnt  +downstreamnt
gtgcgtgggataatcctgcgcaacctctctttttccgccggtgtccacttgaaaaaaatt
ctcgcgctcagtcttctgctcagttttctatttttatcttctttactgccggccagcgtc
caggcacaagaatcatcgcttcctcctacgtttagcaaggccctgcaagtagccggcatt
ccagtccagagcgttggcgtgtacgtgcaggaagtcgacggcacgggccaggtgctggcg
tcgtcgaatgccgccatgcccttcaatccggcctcgaccatgaaactggtcaccaccgac
gccgcgctggagctgctggggccgacctaccgctggaaaacccaggcttacgccagcggc
agccaggtcggcaatgtcttgcagggcgacctgattttcaaaggcaatggtgatcccaag
ctggtgctggaaaacttttggctgttcctgcgccagatccgcgccaagggcatccgcgat
atccgcggcaatatcgtgctggaccgtagcgctttcgatcaaaacgcctacgatccctcc
gaattcgatggcgatccgatgaaaccgtacaacgtcggcccggatgccttgctgctgaac
tacaagacgctgaccttccagttcgtgcccgatgccgacaagcgccaggtcagcgtcgtc
ctcgatccacccatgagcggctacccggtgcggccgccgcgcctggggcagggcagctgc
gatgactggcagggcaagctgcaagccgtggtggagaccgatggcgccagtttcaacggc
gcgctgccggcttcctgcggtgaaaagacctggtatgtgaatccctacaagatgaactcc
acgcaatacttcggcgcggtgttccggcagatgtggagcgatctcggcggcagcttcagc
ggcggcgtcaaggatggcctcacgccgcccgatgcccgcctggtcgccgagtggagttcg
gtcaccttgccggaagtgatacgcgacatcaacaaatacagtaacaatgtcatggcgcgc
caggtattgctgaccatcgccgccgatatcctgaaactccctgccacccccgagcgcggc
gcccgcgccatccagagctggctcgccggcaaaggcatagacgccagcggcctggtgatc
gaaaacggttccggcctgtcgcgcaatgaaaagatttcagccaagaccatgggccgcatg
atggccgctgccttccagtcgccgaccatgccggaattcgtctcgtcgatgccgctggta
ggttacgacggcaccatgcgcaagcgcctcaaagaccagagcgtcgccggccaggcccac
gtcaagaccggcaccctgaacgacgtccgcgccatcgccggctacgtcctcgccgcatcc
ggcaaatactacgccgtggtctgcctgatcaaccaccccaacgccccccgcggacaggca
gcgcaagatggcttgctgcagtgggtctatgagaatggttga

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