Collimonas pratensis: CPter91_4543
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Entry
CPter91_4543 CDS
T04306
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cpra
Collimonas pratensis
Pathway
cpra00550
Peptidoglycan biosynthesis
cpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPter91_4543 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpra01002
]
CPter91_4543 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpra01011
]
CPter91_4543 (dacB)
Enzymes [BR:
cpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CPter91_4543 (dacB)
Peptidases and inhibitors [BR:
cpra01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CPter91_4543 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cpra01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CPter91_4543 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AMP06849
UniProt:
A0A127Q9W0
LinkDB
All DBs
Position
complement(4684202..4685683)
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AA seq
493 aa
AA seq
DB search
MRGIILRNLSFSAGVHLKKILALSLLLSFLFLSSLLPASVQAQESSLPPTFSKALQVAGI
PVQSVGVYVQEVDGTGQVLASSNAAMPFNPASTMKLVTTDAALELLGPTYRWKTQAYASG
SQVGNVLQGDLIFKGNGDPKLVLENFWLFLRQIRAKGIRDIRGNIVLDRSAFDQNAYDPS
EFDGDPMKPYNVGPDALLLNYKTLTFQFVPDADKRQVSVVLDPPMSGYPVRPPRLGQGSC
DDWQGKLQAVVETDGASFNGALPASCGEKTWYVNPYKMNSTQYFGAVFRQMWSDLGGSFS
GGVKDGLTPPDARLVAEWSSVTLPEVIRDINKYSNNVMARQVLLTIAADILKLPATPERG
ARAIQSWLAGKGIDASGLVIENGSGLSRNEKISAKTMGRMMAAAFQSPTMPEFVSSMPLV
GYDGTMRKRLKDQSVAGQAHVKTGTLNDVRAIAGYVLAASGKYYAVVCLINHPNAPRGQA
AQDGLLQWVYENG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgggataatcctgcgcaacctctctttttccgccggtgtccacttgaaaaaaatt
ctcgcgctcagtcttctgctcagttttctatttttatcttctttactgccggccagcgtc
caggcacaagaatcatcgcttcctcctacgtttagcaaggccctgcaagtagccggcatt
ccagtccagagcgttggcgtgtacgtgcaggaagtcgacggcacgggccaggtgctggcg
tcgtcgaatgccgccatgcccttcaatccggcctcgaccatgaaactggtcaccaccgac
gccgcgctggagctgctggggccgacctaccgctggaaaacccaggcttacgccagcggc
agccaggtcggcaatgtcttgcagggcgacctgattttcaaaggcaatggtgatcccaag
ctggtgctggaaaacttttggctgttcctgcgccagatccgcgccaagggcatccgcgat
atccgcggcaatatcgtgctggaccgtagcgctttcgatcaaaacgcctacgatccctcc
gaattcgatggcgatccgatgaaaccgtacaacgtcggcccggatgccttgctgctgaac
tacaagacgctgaccttccagttcgtgcccgatgccgacaagcgccaggtcagcgtcgtc
ctcgatccacccatgagcggctacccggtgcggccgccgcgcctggggcagggcagctgc
gatgactggcagggcaagctgcaagccgtggtggagaccgatggcgccagtttcaacggc
gcgctgccggcttcctgcggtgaaaagacctggtatgtgaatccctacaagatgaactcc
acgcaatacttcggcgcggtgttccggcagatgtggagcgatctcggcggcagcttcagc
ggcggcgtcaaggatggcctcacgccgcccgatgcccgcctggtcgccgagtggagttcg
gtcaccttgccggaagtgatacgcgacatcaacaaatacagtaacaatgtcatggcgcgc
caggtattgctgaccatcgccgccgatatcctgaaactccctgccacccccgagcgcggc
gcccgcgccatccagagctggctcgccggcaaaggcatagacgccagcggcctggtgatc
gaaaacggttccggcctgtcgcgcaatgaaaagatttcagccaagaccatgggccgcatg
atggccgctgccttccagtcgccgaccatgccggaattcgtctcgtcgatgccgctggta
ggttacgacggcaccatgcgcaagcgcctcaaagaccagagcgtcgccggccaggcccac
gtcaagaccggcaccctgaacgacgtccgcgccatcgccggctacgtcctcgccgcatcc
ggcaaatactacgccgtggtctgcctgatcaaccaccccaacgccccccgcggacaggca
gcgcaagatggcttgctgcagtgggtctatgagaatggttga
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