Colwellia psychrerythraea: CPS_1007
Entry
CPS_1007 CDS
T00258
Definition
(RefSeq) putative decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
cps
Colwellia psychrerythraea
Pathway
cps00250
Alanine, aspartate and glutamate metabolism
cps00410
beta-Alanine metabolism
cps00430
Taurine and hypotaurine metabolism
cps00650
Butanoate metabolism
cps01100
Metabolic pathways
cps01110
Biosynthesis of secondary metabolites
cps01120
Microbial metabolism in diverse environments
cps02024
Quorum sensing
Module
cps_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cps00001
]
Metabolism
Carbohydrate metabolism
00650 Butanoate metabolism
CPS_1007
Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CPS_1007
Metabolism of other amino acids
00410 beta-Alanine metabolism
CPS_1007
00430 Taurine and hypotaurine metabolism
CPS_1007
Cellular Processes
Cellular community - prokaryotes
02024 Quorum sensing
CPS_1007
Enzymes [BR:
cps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
CPS_1007
SSDB
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Aminotran_1_2
Other DBs
NCBI-ProteinID:
AAZ25150
UniProt:
Q487K9
LinkDB
Position
1027156..1028787
AA seq
543 aa
MKATKRIAEATQESLHRIFTIAEAPDSTLGRLEQEMSQNLVGFLNNHIVASKNALTDIEQ
DFINARIPEQPEFVSDHMHHLLDKLVAQSVHTSSPSFIGHMTSALPSFILPLSKLMVGLN
QNLVKVETSKAFTPLERQVLGMMHNLVYQHDDVFYKNWMHSAEHSLGAFCSGGTVANITA
LWVARNKLLKADGDFRGVAREGLHRAMRHYGYQDLAILVSDRGHYSLKKSADILGIGQEN
VIAIPTDEHNKIDCQKLADKCQQLAAQNIKVLAIVGVAGTTETGNIDPLDKIAEIAQQNQ
CHFHVDAAWGGATLLSNKYRPLLKGIEQADSVTIDAHKQMYVPMGAGLVIFKDPASVSAI
EHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYSSLHIISRPGYEMLINQAIEKAEYFADI
IHQHDDFELITRPELCLLTYRYAPKSVQALLARNDDEANKSVNMLLGKLTKFIQKRQRED
GRSFVSRTRIEVSRYGGEKVIVFRVVLANPLTTKEILQGILQEQCQLAQESEQFLPELLQ
AAK
NT seq
1632 nt
+upstream
nt +downstream
nt
atgaaagcaactaagcgcattgcagaagcaacgcaagagtctttacatcgaatttttacc
attgctgaagctcctgattctaccttaggacgtcttgagcaagagatgtcgcaaaattta
gtgggttttttaaataatcacattgttgctagcaaaaatgccctaactgatattgagcaa
gatttcattaatgctcgtattcccgagcagcctgaatttgtttctgatcacatgcaccat
ttgctcgataaattagtcgcgcagtcagtacatacttcaagtcctagttttatcggtcat
atgacctcagcattgccttcttttattttacctctgtctaagttgatggtgggtttaaat
caaaacttagttaaagttgaaacatcaaaagcttttacgccattagagcgccaagtttta
ggcatgatgcacaacttggtttatcaacacgatgatgtcttttacaaaaactggatgcac
agtgctgaacattcccttggcgccttttgttcaggtggtactgtcgctaatattaccgcc
ttgtgggtagcacgtaataagctgttaaaggctgatggtgattttaggggcgtggctcgc
gagggcttacatcgtgctatgaggcattatggctatcaagacttagctattttagtgtcc
gatcgtggtcattactcattgaaaaaatcggctgatattttaggtatcggccaagaaaat
gttattgcgatacctaccgatgaacataataaaatagattgccagaagctggcggataaa
tgtcagcaactggcagcacaaaatatcaaagtactggcaattgttggcgtggccggtaca
actgaaaccggtaatattgatccacttgataaaattgctgagatagcccagcaaaatcaa
tgtcattttcatgttgatgctgcttggggcggagcaacattattgtcgaacaaatatcgt
cctttgcttaaaggcatcgaacaagctgactcagtgaccattgacgcacacaaacagatg
tatgtgcctatgggggcaggtttggttatttttaaagatcctgcctcggtaagtgcgatt
gagcatcatgcggaatatatattacgtaaaggctcaaaagatttaggtagtcatacttta
gaaggctctcgcccgggaatggcgatgttagtgtattcgagcttgcatattattagccga
ccaggttatgaaatgcttattaatcaggccattgaaaaagcagagtattttgcagatatt
attcaccagcatgatgattttgaactaattactcgccctgaattgtgtctattaacgtat
cgctatgcacctaagtcagttcaggctctattagctcgaaatgatgatgaagctaataag
tcggtgaacatgttgctcggtaaattgaccaagtttattcaaaagcgtcaacgtgaagat
gggcgctcttttgtctcacgaactcgcattgaagtaagtcgatatggtggtgaaaaagtt
atcgtttttagagttgtgttagcaaacccactaactactaaagaaattttgcaaggtata
ttgcaggagcaatgtcagcttgcacaggaaagtgagcaatttttacctgagttgttacaa
gcagcaaaataa
DBGET
integrated database retrieval system
