KEGG   Colwellia psychrerythraea: CPS_2303
Entry
CPS_2303          CDS       T00258                                 
Symbol
holB
Name
(RefSeq) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
cps  Colwellia psychrerythraea
Pathway
cps03030  DNA replication
cps03430  Mismatch repair
cps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPS_2303 (holB)
   03430 Mismatch repair
    CPS_2303 (holB)
   03440 Homologous recombination
    CPS_2303 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cps03032]
    CPS_2303 (holB)
   03400 DNA repair and recombination proteins [BR:cps03400]
    CPS_2303 (holB)
Enzymes [BR:cps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPS_2303 (holB)
DNA replication proteins [BR:cps03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CPS_2303 (holB)
DNA repair and recombination proteins [BR:cps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CPS_2303 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 KAP_NTPase
Other DBs
NCBI-ProteinID: AAZ25121
UniProt: Q482J4
LinkDB
Position
2402386..2403381
AA seq 331 aa
MLQICHEKQVQLSRQYQQDTLAHAIIIQGIEGAGQGALAKWLIELLICQNPLSTTNAAGT
ETISEACGQCKACLLKKSDNYPDHLLLKSENKTLGVDDIRRGNAFLEKTAHLGKVKTILI
PQAQVMTIAAANALLKTLEEPSANSYIVLITDDLDSLLPTIISRCAVYAIRPMIGEALLA
QLKVSNLGDVQLSSSAPLTNKANDTAYINLSHLPELTDKIVHQEFQVFNQYLLDYLLHGQ
SEEKLLSQIVDNKYSLRWLEKITCNLMREYYLVNATDQTLLLIKQKISVQVLNQIYQAII
TSNKLIKSYLQANRQFVGEQLLMTINDIVRP
NT seq 996 nt   +upstreamnt  +downstreamnt
atgctacaaatttgccacgaaaagcaagtgcaattgagccgacaataccaacaagatacc
ttagcacatgccattatcattcaaggtatagaaggtgctgggcaaggtgcattggcaaag
tggttaattgagttgttaatatgtcaaaatccgttatcaacaactaatgctgctggaact
gaaaccatcagtgaagcctgtggtcaatgtaaggcctgcctgcttaagaaaagtgataac
tatccagaccacttattgttgaagagcgagaataaaactttaggggttgacgacattcgt
cgtggcaatgcatttctagaaaagactgcccacctaggcaaggtgaaaacgatattgata
ccacaagctcaggtaatgactattgctgcagctaatgcattactaaaaacattagaggag
ccaagtgccaatagttatattgtattaattacagacgatcttgatagcttattaccgaca
ataataagtcggtgtgctgtttatgccattagacctatgataggcgaggccttgttggca
caactcaaggtatcgaaccttggcgatgttcaactatcaagtagtgctcctttgactaat
aaagctaatgacactgcttatattaatttatctcatttacctgaattaaccgataaaatt
gttcatcaagaatttcaggtttttaatcaatatttattagattatttactacatggtcaa
agtgaagaaaagttattgagtcagattgttgataataagtacagtttacgttggttagaa
aaaataacctgtaatctaatgagagaatattaccttgttaatgcaacggatcagacctta
ttgcttattaaacagaaaatttcagtgcaagtgcttaatcaaatatatcaagctatcatc
actagtaataaactgataaaatcttatcttcaagctaatcgacaattcgtcggtgaacag
ttacttatgacgataaatgatatcgttagaccatag

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