KEGG   Colwellia psychrerythraea: CPS_4379
Entry
CPS_4379          CDS       T00258                                 
Symbol
orn
Name
(RefSeq) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
cps  Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:cps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cps03019]
    CPS_4379 (orn)
   03009 Ribosome biogenesis [BR:cps03009]
    CPS_4379 (orn)
Messenger RNA biogenesis [BR:cps03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CPS_4379 (orn)
Ribosome biogenesis [BR:cps03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    CPS_4379 (orn)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AAZ28688
UniProt: Q47VZ4
Structure
LinkDB
Position
complement(4614869..4615414)
AA seq 181 aa
MAGNDSNLIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNP
WCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYM
PDFEDHFHYRNLDVSTIKELAKRWKPEVLESVVKTGAHLALDDIKESIAELKVYRELFFK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atggcgggtaacgacagtaatttaatttggcttgatttggaaatgacaggcctcgagcct
gtagaagatgtaattttagagatcgctatcattattaccgatagcgagttaaatatctta
gcgcaagggccaatttttgccattagccaaactgatgatgtgctagataacatgaatcca
tggtgcattgaacatcacgggaaatcaggattaactcaacgttgccgcgacagtgaagtg
agcttggctcatgcaactaaagaaagcttagcttttgttcaagagtgggtacctcaaggt
aagtcacccatgtgtggtaatagtatcggtcaagatagacgattcataaataaatatatg
cctgattttgaagatcatttccattaccgaaacttagatgttagtacaataaaagagctg
gcaaaacgttggaagccagaagtactagagtctgttgttaaaacgggggctcacttagcc
ctagatgacatcaaagagtcgatcgctgagttaaaagtatatagagaacttttcttcaag
ttatag

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