Colwellia psychrerythraea: CPS_4379
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Entry
CPS_4379 CDS
T00258
Symbol
orn
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cps
Colwellia psychrerythraea
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cps03019
]
CPS_4379 (orn)
03009 Ribosome biogenesis [BR:
cps03009
]
CPS_4379 (orn)
Messenger RNA biogenesis [BR:
cps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPS_4379 (orn)
Ribosome biogenesis [BR:
cps03009
]
Eukaryotic type
Pre-60S particles
RNases
CPS_4379 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AAZ28688
UniProt:
Q47VZ4
Structure
PDB
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All DBs
Position
complement(4614869..4615414)
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AA seq
181 aa
AA seq
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MAGNDSNLIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNP
WCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYM
PDFEDHFHYRNLDVSTIKELAKRWKPEVLESVVKTGAHLALDDIKESIAELKVYRELFFK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaacgacagtaatttaatttggcttgatttggaaatgacaggcctcgagcct
gtagaagatgtaattttagagatcgctatcattattaccgatagcgagttaaatatctta
gcgcaagggccaatttttgccattagccaaactgatgatgtgctagataacatgaatcca
tggtgcattgaacatcacgggaaatcaggattaactcaacgttgccgcgacagtgaagtg
agcttggctcatgcaactaaagaaagcttagcttttgttcaagagtgggtacctcaaggt
aagtcacccatgtgtggtaatagtatcggtcaagatagacgattcataaataaatatatg
cctgattttgaagatcatttccattaccgaaacttagatgttagtacaataaaagagctg
gcaaaacgttggaagccagaagtactagagtctgttgttaaaacgggggctcacttagcc
ctagatgacatcaaagagtcgatcgctgagttaaaagtatatagagaacttttcttcaag
ttatag
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