KEGG   Coccidioides posadasii: CPC735_005120Help
Entry
CPC735_005120     CDS       T01332                                 

Definition
(RefSeq) ATP-dependent DNA ligase, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cpw  Coccidioides posadasii
Pathway
cpw03030  DNA replication
cpw03410  Base excision repair
cpw03420  Nucleotide excision repair
cpw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPC735_005120
   03410 Base excision repair
    CPC735_005120
   03420 Nucleotide excision repair
    CPC735_005120
   03430 Mismatch repair
    CPC735_005120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpw03032]
    CPC735_005120
   03400 DNA repair and recombination proteins [BR:cpw03400]
    CPC735_005120
Enzymes [BR:cpw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CPC735_005120
    6.5.1.6  DNA ligase (ATP or NAD+)
     CPC735_005120
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CPC735_005120
DNA replication proteins [BR:cpw03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CPC735_005120
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CPC735_005120
DNA repair and recombination proteins [BR:cpw03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CPC735_005120
   NER (nucleotide excision repair)
    Other NER factors
     CPC735_005120
   MMR (mismatch excision repair)
    Other MMR factors
     CPC735_005120
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C NuDC Abhydrolase_9
Motif
Other DBs
NCBI-GeneID: 9693968
NCBI-ProteinID: XP_003068485
UniProt: C5P9C8
LinkDB All DBs
Position
Unknown
AA seq 877 aa AA seqDB search
MTWSFMRKLLQDPERLGISRSVSVQPPLQFQRTWKTLYSLLSRDEDMSNPVRKRKRGDPG
DPPRTFRSIDSFFKSPRKQPHEADCRIPKSPSEHQLLTDEELARKLQAEWDNDASSNFRN
ATPTNSDENQAPPSQDMKASDGQHPIPAPPKPCIFASSKKKKSVLSLQTSTSAEDTISMS
LPLDQPPLTFNPSLYLDKLREFWNTEGGHASYSILARAFSLVNSTQSRIRIVDILVNLLR
ILIEGDPDSLLPAVWLATNAFAPPYVPLELGLGGSAISKALKKAYGLDNLGLKTLYDKYG
DAGDVAYEAKKKQSFTLRRPKPLSIKGVYDSLMKIANSKGTGSQENKQRLVEQLLRDARG
AEESRYIVRTLVQHLRIGAVRTTMLIALARAFLYSRPPSASYRVRTNADLMKLKRDELAS
LYAKAEEMIKASYARHPNYNDLIPCLLATGISEAVLAKCGLALHVPLLPMLGSITRDLTE
MLTKLQGRKFSCEYKYDGQRAQVHCDSSGKVSLFSRHLELMTDKYPDLVSLVPQIRGDGV
SSFVLEGEVVAVDQESGVLLPFQTLSNRAKKNVEIGDIKINVCLFAFDLMYLNGEALLER
PFRERRELLRSLFVEIPNRFSWVKSIDATSSESETILNFFQEATNAKCEGIMVKVLDDGT
DGEAPGILTSEESSNISGEKQKGSRRRTLLSTYEPDKRLDSWLKVKKDYNAAFDTLDLIP
IAGWHGQGRKAQWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQENKEKYAENSNNTIP
RPSYVEYRNEPEVWFEPQEVWEIAFADITLSPTYTAAIGMASEERGLSLRFPRFLRVRED
KTIEDASTSSTLAELWKKQMARLQSEGADLPQEEENG
NT seq 2634 nt NT seq  +upstreamnt  +downstreamnt
atgacgtggagcttcatgcgaaagttgctccaagatccagagaggcttggcatatcccgc
tctgtctccgttcaaccgccgcttcagttccaacgcacttggaagactctatacagtcta
ctgagtagggatgaagatatgtccaatcccgtcagaaaacgcaaaagaggcgatcctggt
gacccgccgaggacatttaggagtattgactcctttttcaaaagcccaagaaagcaacca
cacgaagccgactgtcgcataccaaaaagcccttcggaacaccaattactgacagacgaa
gagcttgctcgaaagctgcaagcagaatgggataatgatgcttcttcgaatttccgaaat
gccacgcccacaaattcggacgaaaaccaggcgccgccgtctcaagacatgaaggccagc
gacggccagcaccccatccccgcgcctcctaagccatgtatattcgcttcttccaaaaaa
aagaaaagtgttctgtccctccaaacctccacatccgcggaagacacaatatctatgtcg
ttgccgctcgatcagccacctctaacatttaacccgtctctctacctcgacaaacttagg
gaattctggaataccgaggggggccatgcttcctattcgatattggccagggcgttctct
ctagtcaacagcacacaaagcaggatcaggattgtggatatcttggttaatttattgaga
attttaatcgaaggggatccggatagtctgctcccagcggtctggcttgctacaaacgcg
ttcgcaccaccatatgttccgcttgaattaggattgggaggatctgccatctcaaaggca
ttgaagaaggcttatggattggataacctgggtctaaaaactctttatgacaaatatgga
gatgccggtgatgtcgcctatgaagctaaaaagaagcaatcctttacgttaagacgacca
aagccgctctccatcaaaggtgtttatgattcgctaatgaaaatcgctaacagtaaaggg
acaggcagccaggaaaacaaacagaggcttgtggaacagttacttcgagacgcgagagga
gctgaagaaagtcgatatattgttcgaaccctcgtccagcacttgcgcatcggagctgtc
agaaccaccatgcttattgcattggctcgtgccttcctctattcaaggcctccgtcggct
agttatagggttcgtaccaatgctgatcttatgaagcttaagagggatgaacttgccagt
ttatatgcaaaagcagaggagatgattaaagctagctacgctcgtcacccaaattataat
gacctgataccatgccttttagcaacgggtatctcggaggctgtcctcgctaaatgtggc
ttggcacttcatgttcccttgttgccaatgctaggaagcatcacgcgtgacttgacagag
atgcttaccaaacttcaaggcagaaaattcagctgcgaatacaaatatgacggccagcgc
gcgcaagtgcattgcgattcatcgggaaaagtctcgcttttttcccgccacttggagctg
atgacggataaatatccggatctagtatctctcgttccgcagattcggggagacggtgtg
tccagcttcgtccttgaaggggaagtggtcgccgtggaccaagaatctggggttttgtta
cccttccagacgctttctaatcgggcgaagaaaaacgttgagataggggacatcaaaatt
aatgtttgtctttttgcattcgatcttatgtacttgaacggagaagcgttgttagaaaga
ccttttagagaaagacgtgaactcttgcgaagtctttttgtggagatacccaaccggttt
tcctgggtgaagagcattgatgcaacgtcttccgagtcggaaacgattctcaattttttc
caggaagccacaaacgcaaaatgcgaaggtattatggtgaaggtcttggatgatggtacc
gatggcgaagcacccggcatcctcaccagcgaagagtcgtccaatatttccggcgagaaa
cagaaagggtcacgaaggcgcactttgctctctacttatgagcctgataaacgactcgat
tcgtggctcaaggtgaagaaagactataatgcagccttcgatactctggacttaattccc
attgccggttggcatggccagggacgaaaggcccaatggtggtcaccaattctccttgca
gttcgaaatccggaaactggctcactggaagctgtcaccaagtgcatgtctggttttact
gacaaattctatcaagaaaacaaagagaagtacgccgagaatagcaacaatactatccca
aggccaagctacgtggagtataggaacgagcccgaggtatggtttgaacctcaggaggtt
tgggaaattgctttcgcagatatcacacttagcccaacgtacacggcagccatcgggatg
gccagcgaggaacgtgggttaagcctgaggtttccaagattcctcagggttcgtgaagat
aaaaccattgaagacgcaagcacttccagcacccttgctgagctctggaagaaacaaatg
gcgcgactgcaaagcgaaggtgctgatttgccgcaagaagaagaaaacggctga

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