KEGG   Coccidioides posadasii: CPC735_016310Help
Entry
CPC735_016310     CDS       T01332                                 

Definition
(RefSeq) DNA ligase I, ATP-dependent family protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cpw  Coccidioides posadasii
Pathway
cpw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CPC735_016310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpw03400]
    CPC735_016310
Enzymes [BR:cpw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CPC735_016310
DNA repair and recombination proteins [BR:cpw03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CPC735_016310
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 RNA_ligase DNA_ligase_A_C BRCT LIG3_BRCT RTT107_BRCT_5 DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID: 9692646
NCBI-ProteinID: XP_003067175
UniProt: C5PD69
LinkDB All DBs
Position
Unknown
AA seq 985 aa AA seqDB search
MDRLNNVGRETERELDEKYPNRPRNKHSTLPFHDLFLTLFNPLNGNKKRPTGPAAARKKL
GPHGGQQTLSPQELRRDIIQRFISRWRKEVGNDIYPAFRLIIPEKDRDRAMYGLKEKTIG
KLLVKIMKIDKNSEDGFNLLNWKLPGQSMASRMAGDFAGRCYEVISKRPIRTDVGNMTIQ
EVNDKLDVLAATSKEDEQIPVLEEFYRNMNPEELMWLIRIILRQMKVGATERTFFEIWHP
DAESLFSISSSLRRVCWELYDPNVRLEADEARVTLMQCFQPQLAQFQMHSFPKMIERMRL
SPDDPTFWIEEKLDGERIQLHMMSDDSIPGGKRFGFWSRKAKDYTYLYGNGFYDENGALT
RHLKDAFADGVDNIILDGEMITWDPEQDAPLPFGTLKTAALSEQRNPFSATGQRPLFRIF
DILYLNDKALTRYTLRDRRRALEASIKPVHRRLEVHPYEIGNSAADIEPQLRKVVAEASE
GLVLKNPSSPYRLNDRHDDWMKVKPEYMTEFGESLDCVVIGGYYGSGKRGGGLASFLCGL
RVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTDGKWKDWNPKKPPTEFIELAGG
DAQYERPDVWIRPDESVVLCVKAASVTPSDQFRLGLTVRFPRFKRLRMDKDWKSALSIQE
FMDLKANAEREQKEKEFKIDNSRRKRAKRAVKKPLTIAGYDESKRAGFTGPSGHVFEGMN
FFVITDSVELEKKSKLELEQLIKANGGKIYQTHTAAPNTLCIAERRTVKVASVQKVAKES
IIRPSWLFDCIKQNEIDKGLPDLLIPFEPRHMYFTVKSQEEEIARHVDEYSDSYVRDITP
NELSKLLVSMPLIPNLPPPHISKTETQIQERESTFQELRGWLFKNQVLHFVKPRSDSMLS
LPLRLASNLARFAGASVANELEDKSITHVVIDTDSQPADVSALRSAISKRVAAGRRIPHL
VTIAWIQDSWKAESLLDEERFAPTA
NT seq 2958 nt NT seq  +upstreamnt  +downstreamnt
atggaccgattgaacaacgttgggagagagaccgagagggagctcgatgagaaatatccc
aaccgtccccgcaataaacactcgacattacctttccatgaccttttccttacgcttttc
aatcccctaaatggaaacaagaagagaccaacaggacctgccgccgctcgcaagaagttg
ggaccacatggaggacaacagaccctttccccgcaggaattacggcgagatattattcaa
cgtttcatttcacgatggagaaaggaagtggggaatgatatctatcctgcgtttcgattg
atcatacctgagaaagatcgagatcgtgcgatgtatggcttgaaagagaagacaattgga
aaactgctggttaaaattatgaaaattgataaaaactccgaagatggatttaaccttttg
aactggaagcttccaggccaaagcatggcgagtcgaatggctggcgattttgctggtcgc
tgctacgaagtgatatcaaagcgacctataagaacagatgttggcaacatgaccatccag
gaggtcaatgacaaactggatgttctagctgccaccagtaaggaagatgagcagatacct
gttcttgaagagttctacagaaacatgaaccctgaagaactaatgtggctcataagaatc
attttgcgtcaaatgaaagttggagccactgagcggacgttcttcgagatatggcatcca
gatgcagagagcctgtttagcatatccagcagccttcggcgcgtttgttgggaattatat
gacccgaatgtccgcctggaggccgatgaagcacgggtgacgctcatgcaatgctttcaa
cctcaattggcgcagtttcaaatgcattcatttccaaagatgatcgagaggatgcggctc
tcccctgacgatccaacgttctggatcgaagagaagctagatggtgagcgaatccagctt
catatgatgtccgacgactccattcctggaggtaaaagatttggattctggtcacgtaaa
gcaaaggattatacatatttgtatgggaacggattctacgatgagaatggagcattgacg
cgacatcttaaagatgcttttgcagatggtgttgataacatcattctcgatggagaaatg
attacctgggacccagaacaagacgcaccattgccctttggcacgctcaaaacagcagct
ttatcagagcagaggaacccattctcggctactggccaaaggcccttatttcggattttc
gatatcttgtacctcaatgataaagccttaaccagatacacattacgggatagaagacga
gcccttgaagccagtatcaaaccagtccatcgtcgtttggaagttcatccctacgaaatc
ggtaattctgctgcagatattgagcctcagctccggaaggtggtggcagaggcatctgaa
gggcttgttcttaagaatccaagttcaccttatcgtctgaatgaccgccacgatgattgg
atgaaagtgaaacctgaatatatgacggagtttggtgaatcccttgattgcgttgtgatc
ggtggatactatggctcaggtaaaaggggcggtggattagcaagttttctgtgtggactg
agggttgacgaagcccaagttcgacagggggctagcccgatgaaatgctactcatttctt
aaagttggaggaggattcacggctccagactatgcgaatattcgccaccataccgacggc
aaatggaaagattggaatcccaagaagccgccaactgagtttattgaattggctggtggt
gatgcacagtacgaacgccctgacgtatggattcggcccgatgagtctgttgttctgtgt
gtcaaagcagcctctgtgactcctagtgaccagtttcgattggggttgacagttcgcttt
ccgcgattcaagcggttacgaatggataaggattggaaaagcgccctgtccattcaagaa
ttcatggacttaaaggcgaatgcagaaagagagcagaaagaaaaggaattcaagatcgat
aactcccgaagaaaacgggcgaagagggctgtcaagaaaccccttacaattgctggatac
gatgaaagcaaaagggccggttttacaggtccatcagggcatgtttttgaaggaatgaat
tttttcgttattacggattcagttgagctggagaaaaagtccaaacttgagctggaacaa
ttgatcaaagcaaatggcgggaaaatatatcaaacccatacagcggcacctaatactctt
tgtattgcagagagaagaactgttaaggttgcatctgtgcaaaaagtagcaaaagaaagt
atcattcgtccgtcttggctgtttgactgcattaagcagaatgaaattgacaaagggcta
ccggatttgttgatccccttcgaaccgagacatatgtattttacggtgaaaagccaagaa
gaagagatagcccgacatgtggacgaatattcagatagctacgtgcgagatattacccca
aatgagctaagcaagcttcttgtttcgatgcccctaatccctaatctcccaccaccccac
atttcaaaaacggaaacccagatacaagaacgagaaagcaccttccaggagctgcgaggc
tggctattcaaaaaccaagtgctacattttgtcaaacctcgatcggattccatgctgtcg
ctccctctacgtcttgcgtctaatcttgctcgatttgcgggtgcttcggtggcaaatgaa
ctggaggacaaaagcatcacccatgtcgtcattgacacggacagtcaaccggctgatgtt
tctgctttgcgctctgcgatatcgaagcgtgtagctgctgggagaagaattccgcatctt
gtgactattgcctggatccaagacagctggaaggcagaatcattgctagatgaagagcgg
ttcgctccgaccgcctag

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