Lachnoclostridium phytofermentans: Cphy_0017
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Entry
Cphy_0017 CDS
T00619
Name
(GenBank) ABC transporter related
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cphy_0017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpy02000
]
Cphy_0017
Transporters [BR:
cpy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cphy_0017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_30
RsgA_GTPase
AAA_22
AAA
AAA_23
TsaE
AAA_29
MMR_HSR1
Zeta_toxin
T2SSE
AAA_19
SRP54
SbcC_Walker_B
AAA_7
DUF677
DEAD
AAA_5
AAA_24
nSTAND3
AAA_18
AAA_16
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ABX40408
UniProt:
A9KPQ7
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All DBs
Position
complement(29061..30842)
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AA seq
593 aa
AA seq
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MAVNAIKEDESLHVASKKNTLLRLYRYLLAYKKSIAVVLLIMCGTITISLINPIIIEKAI
DKYIKGGNINGLIKLGIFALVLNITLVILVKLRMYIMSKLSNSVLVTIRQELYTHIQTLS
FKFFDSRPTGKILARIMGDVNSLKDVLSNSVTTLIPDFITICSVVIIMFVKNYKLALASL
CSFPLMAFGVWFVQTRAHKRWQIHKKKSSNVNAFIHEDVSGMRIIQSFGAEDETEEEFDE
LLKEHRDSFMSAVRFADAFGPIVDICWALATLFLFLVGVNLIGKDPSVEVGTIVAFGSYI
SMFWHPLLNLSNFYNQLITNITGAERIFEILDTKPDVNDAKDVHTLPNVRGEVDFKHVSF
SYDEDTNVLRDVSFHVKPGETIALVGPTGAGKTTIINLISRFYDIQKGTITIDGYDLTKV
SIESLREQMGVMTQDNFLFTGTIKENISYGKLDATDEEIITAAKAVNAHEFIMKMEKGYD
TELKERGAGLSIGQKQLLAFARTMVSKPKILILDEATSSIDTHTELLVQKGIEALLKGRT
SFVIAHRLSTIQKADRIFVIDNGGIIESGSAAELLERKGAYYNLYMAQFKNIA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaatgctataaaggaagatgaaagtcttcacgtagcctctaaaaagaatacc
ctgctaagactatatcgctatctacttgcctataagaaatctatcgctgttgtattactt
attatgtgtggtacaattaccatttctttgattaatcctataatcatagaaaaagcaatt
gataaatatatcaagggtggtaatataaatggattaataaaacttggaatctttgctctt
gtattaaatataaccttagtaatcttagtaaagcttcgaatgtacattatgtccaaatta
tccaatagtgtacttgtaacaatacgtcaggaactttacactcatatacaaaccttgagt
tttaaattctttgactcaagaccaaccggtaaaatccttgctcgtattatgggtgatgtt
aactccctgaaagatgtattaagtaatagcgtaacaactttaatccctgatttcattacc
atatgctccgttgttattattatgtttgtgaaaaactataaactagcactggcttccctt
tgtagctttccactgatggcatttggtgtttggtttgttcagacaagagctcacaaacgt
tggcagattcataagaagaaaagctctaatgtcaatgccttcattcatgaagatgtatct
ggaatgcgtattatacaaagttttggtgcagaagatgaaacagaagaggaattcgacgaa
ttattaaaagagcatcgtgactcttttatgtcagcagtacgatttgcagatgccttcgga
ccaatcgttgatatctgctgggcgcttgccaccctatttttattccttgttggcgtcaat
ctaattggaaaggatccaagtgtagaagttggtaccatagtagcttttggttcttatatc
tccatgttttggcatccacttctaaacttaagtaacttttacaatcagttaataacaaat
attaccggtgcagaacgtatctttgaaattctagatacaaagccggatgttaatgatgca
aaagatgtccataccctgcctaatgttcggggtgaggtcgattttaagcatgtctccttt
tcttatgatgaggataccaatgtccttcgtgatgtcagcttccatgttaagcctggagaa
acgattgctttggttgggccaactggcgctggtaaaacaacaattattaaccttattagc
agattttatgatatccaaaaaggtactatcacgattgatggctacgacctaactaaggta
tctatcgaaagcttacgtgagcagatgggtgtcatgacccaagataatttcttattcact
ggtaccatcaaggaaaatataagttatggtaaacttgacgctactgacgaagaaattatt
actgcagcaaaagcggtgaatgcacatgaattcattatgaagatggagaaaggttatgat
acagaattaaaagagcgtggtgctggtttatccattggacaaaaacaattattagccttt
gcacgtactatggtatcaaaacctaaaattttaatattagatgaagcaacttctagtatt
gatactcatacagagctacttgttcaaaaaggaatagaagcattactaaaaggacgtacc
tcctttgtaattgctcatcgtctttctaccatacagaaggcagatcgtatctttgttatc
gataatggtggcattattgaatccggttctgccgcagagcttcttgaaagaaaaggagct
tactacaacctatatatggctcagtttaaaaatatagcatag
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