Chenopodium quinoa (quinoa): 110735462
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Entry
110735462 CDS
T05764
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
cqi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110735462
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110735462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110735462
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110735462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
110735462
NCBI-ProteinID:
XP_021771344
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MDDAEGVGGGGGDQVEQFHRNEAISAVTDEGFGEEDDDYEDLYNDVNVGEGFLQSLRKNE
EVGFRNDGESSRLEPPQSQSLSQHPPPPFLSEDDGLSIPGVGQGEGERKFEGDVGRVDGF
QNQGLRGSDVKGPVQPNGGMGSGSGAGVSGAGRGYGGGLRVELGPHSSKVGDVDEQAVNS
MPPQGISQPQQPHGMSVGNEGIVRQGGGGGVVNGTAGNMSGTGSSAVQVTPMGAGMGGAG
GGGGGGNVLFVGDLHWWTTDAELETELVKYGNVKEVKFFDEKASGKSKGYCQVEFYDAAA
ALACKEGMNGHVFNGRPCVVAFASPFTVKRMGEAQVNRNQQTTPQTLSQPRRGPAEGGNK
PTGNNISTGGNYQGGDQNRNFMRGSWGRGNPQGMGGRGPVGPIRNRPAGGMAGRGIMGNG
GNGFGQGMGPSPPMMHPQAMMGQGFDPGFGGPMGRMGNYGGFPGGPQPPFQGLMSNFPPV
GNVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVDGPNMGMWSDPNMGAWAGDEHAGRAA
ESSYGEEAVSDHQYGEASHDRTGWQNPVKEKVPDRDFSGSSDRKYREDREPGYDRDIPRE
KEAAHDHEWPDRRHRDDRETRDRERDRDRERSRDRDRERSRDRDRERERDRDRYREDRDR
YADHHRYRDREADYDEEWERRPSRTHSKSRVSQEEERPRSRDADYGKRRRITSE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgctgaaggggtaggaggagggggaggagatcaggtggagcaattccatcgt
aatgaagcgatttctgcagttactgatgagggttttggtgaggaagatgatgattacgag
gatctttataatgatgttaatgtaggagaagggtttttgcaatctttgaggaaaaatgag
gaagtagggtttaggaatgatggtgaaagtagtaggcttgaacctcctcagtctcagtct
ctatctcagcatcccccacccccctttttgtctgaggatgatgggttgtcgattccgggt
gtcgggcagggtgagggagagagaaagtttgagggtgatgtgggtagagtagatgggttt
cagaatcagggtttaagagggagtgatgttaagggccctgtacagcctaatggtggtatg
ggttctggttcaggagctggggtgtctggtgcagggcgtggttatggaggtggactgagg
gttgagttagggccacattcgagtaaagtaggtgatgtagatgagcaagcagttaatagt
atgccacctcaagggattagtcaaccccagcagccacatgggatgagtgtaggaaatgag
ggaattgttagacagggtggtggaggtggggttgtgaatgggactgctgggaacatgagt
ggaacaggaagttctgctgtgcaagttacgccaatgggtgctggtatgggtggtgctggt
ggaggagggggtggtgggaatgttctttttgttggagatttgcattggtggactacggat
gcagaacttgaaactgagcttgtcaagtatgggaatgttaaagaagttaagttttttgat
gaaaaagctagtgggaagtcgaagggatattgccaggttgagttctatgatgctgctgct
gctttagcttgtaaggagggaatgaatggacatgttttcaatggcaggccatgtgttgtt
gcatttgcttctccatttactgtcaagaggatgggtgaggcacaggttaatagaaatcaa
cagacgacaccacaaacactttcacaacctaggagaggccctgccgagggtggaaataag
ccaactgggaacaacatatcaactggtggcaattaccaaggtggggatcaaaacaggaat
tttatgagaggcagttgggggagaggcaatcctcaaggcatgggtggtaggggaccagtt
ggacctataagaaacaggcctgctggtgggatggctggaagaggtattatgggaaatggt
ggcaatgggtttggtcaaggtatggggccatctcctccgatgatgcatcctcaagccatg
atgggtcaaggttttgatcctggttttggagggcctatggggagaatgggcaattatggt
ggattcccgggtggacctcaacctccatttcaaggattaatgtcaaatttcccacctgtg
ggtaatgttggcctgcctggagtagctccacatgtgaatcctgcattctttggaagaggc
atgcccatgaatgggatgggaatgatgcctaatgctggtgttgatggtcctaatatgggt
atgtggtctgatcccaatatgggtgcatgggctggtgatgagcatgctgggagagctgca
gagtccagctatggggaagaagctgtgtctgaccatcaatatggagaggcaagccacgac
cggactggttggcagaatcctgttaaagaaaaggttcctgatagagacttttcagggtct
tctgataggaagtatcgggaagatagggagcctggatatgacagggatatacctagggag
aaagaggcagcacacgatcatgaatggccggatagaagacatcgtgatgacagagaaacc
cgtgaccgtgagagggaccgtgatcgtgaacgctcacgcgaccgtgatcgtgagcgttct
cgtgatcgagatcgtgagcgagaaagggacagggatcgctacagagaagacagagataga
tatgctgatcatcataggtacagggaccgtgaagcagattatgatgaagaatgggagagg
cggccatcgaggactcatagtaagtcccgtgtgtcccaagaagaagagcgtccaagatct
agagatgctgactatgggaagaggaggaggataacttctgaatag
DBGET
integrated database retrieval system
