Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ006204
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Entry
CpipJ_CPIJ006204 CDS
T01079
Name
(GenBank) DEAD box ATP-dependent RNA helicase
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ006204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ006204
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CpipJ_CPIJ006204
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CpipJ_CPIJ006204
Complex C
U5 SnRNP specific factors
CpipJ_CPIJ006204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
EDS27249
VectorBase:
CPIJ006204
UniProt:
B0WGV5
LinkDB
All DBs
AA seq
818 aa
AA seq
DB search
MPRGGSRQGGGSSTALRTHARRDRGFPRDRPQQRDRNYGNDRDLDQRDNRGRGHRSPPPL
RGDRGDRGQDLGGRKRSRSRERERDDKRKRDERKSEADPDVEEVKAEVKPTVGGSKKEPL
SLEELLAKKKAEEEARSKPKFITKEQRAAEALKRRQEEVAAMKAAQASNVPKFGDVPVTA
LLNREKRDPLEKYDRRERERERERERMERIRNREREGKGKDGEGDDKVGRGAVVEENPVK
DKEKETEAIRERYLGIIKKKRRVRRLNDRKFVFDWDAAEDTSVDYNNLYKERHHVQFFGR
GNIAGIDIKEQKRKQSKFYGDLLEKRRTDAEKEQEKVRLKKVKKKEDKQKWDDRHWSEKE
VDEMTERDWRIFREDYNVTIKGGKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQA
IPIGLQNRDIIGIAETGSGKTLAFLIPLLNWIQGLPKIERQETADQGPYAIILAPTRELA
QQIEEETQKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLN
QCTYIVMDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQT
VMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVHIVTENEKRKKLMEILSRG
VEPPCIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREYALASLKNGSKDILVATD
VAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFCTKDDSHLFYDLKQI
IVASPVSSCPPELMNHPDAQHKPGTVVTKKRREEKIFA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaggaggttcccgacaaggagggggatcatctaccgcgctccgcacacatgct
cggagagaccgtggattcccgcgtgatcgtccacagcagcgcgatcgcaactacggcaac
gaccgggacttggaccagcgggacaaccgaggccgaggccaccggagtcctccaccgttg
aggggagatcgcggggaccgtggccaggatttgggcggcaggaagcgatcacggtcgcgg
gaacgcgaacgggatgataagcggaagagagacgagcgcaagtccgaggcagatccggat
gtggaggaggttaaggcggaggtgaaaccgacggtgggtggttcgaagaaggaaccactt
tcgctagaggaactgctggcgaagaagaaggcggaggaggaggcccggagcaagccgaag
tttatcacgaaggagcaacgggcggcggaagcgctgaagagacggcaggaagaagtggcc
gcgatgaaggcggcgcaggcctcgaatgtgcccaagtttggggacgttccggtgacggca
ctgttgaatcgggagaagcgagatccgctggagaagtacgaccggagggagagggagcgg
gagcgtgaacgggagagaatggagaggattcggaaccgtgaacgtgagggcaaagggaag
gatggggagggagatgataaggttgggagaggagcggtggttgaggagaatccggttaag
gataaggagaaggaaacggaagcgattcgagagcggtatttgggaataatcaagaagaag
cgacgcgtgcgaaggttgaacgaccggaagtttgtgtttgattgggacgcggcagaggac
acttcggtggattacaacaatctgtacaaggagcggcaccacgtgcagttctttggccgc
gggaacattgccgggattgacatcaaagagcagaagcgaaagcagagcaagttttacgga
gatttgttggagaagcgacgaaccgacgccgagaaggagcaggagaaggtccggttgaaa
aaggtcaagaagaaggaggacaaacaaaagtgggacgaccggcactggtcggagaaggaa
gtggacgagatgacggaacgtgattggcgtattttccgagaggattacaacgtaacaatt
aagggtggtaagattccgaacccgatccgtagctggaaggagtccggctttccgaaggag
gtgctggagatcatcgacaaggtcggctacaaggaaccgactccgattcagcggcaggcc
attccgattggactgcagaatcgtgacattatcggtattgctgaaaccggttctggtaag
actttggccttccttatcccgctgctgaactggatccagggtcttccgaagattgaacgg
caggaaacggcggaccaaggtccgtacgcgatcattctggctccaacacgtgagttggcc
caacaaatcgaagaagaaacgcagaaattcggtcaaccgctcggcatccgaaccgtcgtc
gtcgtgggaggtttgtcccgtgaagagcaaggcttccgtctacggttgggttgtgaaatc
gtcatcgccactccgggtcgtctgattgacgtgctcgagaatcgctacctggtcctgaat
cagtgcacgtacatcgtcatggacgaggccgatcgtatgattgacatgggcttcgaaccg
gacgtccaaaagatcctcgagtacatgcccgtgacgaacctcaagccggacacggaagaa
gccgaggacgccaccaaactgatggagaacttcaacacgaagaaaaagtaccgccaaacg
gtcatgttcacggctacgatgcctcccgccgtcgaacgcctcgctcgaacgtatctccga
cgcccggccaccgtttacatcggttccgtcggcaaaccaaccgaacgaaccgaacaaatc
gtccacatcgtcaccgaaaacgaaaaacgcaagaagctcatggagatcctgtcccgcggc
gtcgaacccccgtgcatcatcttcgtcaaccagaaaaagggcgccgacgtcctcgcaaag
ggtctcgagaagctcggctacaacgcgtgcacactccacggcggcaaaggtcaagaacag
cgcgagtacgccctcgcttcgctcaaaaacggctccaaagacatcctggttgccaccgac
gtggctggtcgtggtatcgacatcaaggacgtctcgctcgtcatcaactacgacatggcc
aaaacgatcgaggattacacgcatcgtattggtcgtacgggacgtgccggcaagaccggt
tgcgccatctcgttctgcaccaaggacgacagccatctgttctacgacctcaagcagatt
attgtggcgagtccggtgtcgtcgtgtccgcccgagctgatgaaccacccggacgcgcag
cacaagccgggaacggtcgtgacgaagaagcgaagggaggagaagattttcgcttag
DBGET
integrated database retrieval system
