Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014801
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Entry
CpipJ_CPIJ014801 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K19026
spatacsin
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ014801
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CpipJ_CPIJ014801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-ProteinID:
EDS40967
VectorBase:
CPIJ014801
UniProt:
B0X5N0
LinkDB
All DBs
AA seq
1753 aa
AA seq
DB search
MAAKTVRQPARAYPRVIKFIQQRRHYQYVVLLIEFFFVLLPETEISPLLDKHAVWGYLLR
NNIDNLVKIWIQINACLRAADQHPASYSAEVDKIKIDIYDDPRFNERLRQLFRRWEISDF
MVSQLSGHKSMTKNEVLLNVLATYGKFVEQERGDALVILRRLFTTQTVEVNRGWLEQKVF
WEGLTRHLVENRLFQLMDLSVVSEECLERLAEDENCDNRKELELFMALRGLKEDSISGEG
LLVVSRKSSEYLLETQESFYDDNPIMFLFEHFLDPSNAAFPDDDQRFWKLAHLRSFLARL
KDNPISIVSAKELMNLHGLPCLEKIRSNLFKDLDGTCDEEEASAKKEAVLREHGHVPHFN
HPLLCEKYSTEVKLNYLHYIKQQRSCYALYLFYMDQLRSYARITPQQINSAARTASEVAL
GHYNDANLVSHCTAFIEMLGVDSSRTRAYIRCLNMLNETATLREITTVELIEQCENVLES
RTWHDPNLLLDLEAMTTVCRASQLSFPEKYLKQLLNNNDWFRFLLLVEYLDYPQEQILAL
SKSSFQNATIGSNVMRAIKYHTESAGSLRRESTPTSLKKRNSWTPKKRRRGSSISNAGGD
SHSSVSSESDIQSSTTTTTTTNRRHSTISESSLGGGLDYDGSRYLAERYDRDLFATVLLC
SNEADTLRSSRCALDFDGFRQLMLGRKQGGTFGNLLDRAVARRWPLLAVLAGMVAESNRK
YCWVTWLMVSISYPFYEKLKELSEVEFLQDLLEFSVQKGYVQILQDSVSLFYPDSNLCNL
TKYFINTTKLDFSQITTDHLRHFLLKVNDCPLLGLKKLEMIAFGVKLLTLHVDNNFSSLY
QQTCMLETLVSSDINCFTQKIDFVRLLKFCNILKPTTVRIAFINFFDREDLRQQFEALCE
QLVSHKNYTQAIEIAELSALPRDSIIFEHWISDFETDEECDFSQYQSDMTRYDVGPELLL
NFFIHIANRLEYGNRTKYDLLKRALELIKQHGLYPSQLYDRDRLEYELALAYVKCSENPS
TLPLYHSHFFSNTLKRDGGILYHTFMELKEVAGIDDLTVSNLPLEHPTERSRLDGLIHRL
LKEGDIVQALRYQAIFEQRPYDLHFVVFCMGLAESVLSLYNLSKEERLMLNEDCKRVSLH
MQRRTLRLSRMSQCSANTSSIGSPARLESSDTSAGASEFEEVPSRERQNVLEAINGLGAK
IQYGQDLAQRVILTYRIAMYLDREYNEILKIRDPVGFLEEVIREDCFNKLEVISDIMTSH
RMSDATISRFLAREIVTAVVRSKFYMLQQGSPLANAKPIDELLWGYNIDREFHLFLELAP
NTTMLGNWLLKYCDAIKCYKRLEKSPDRSSMTESVVDDVEPTLLDNLKEIFKNQILSLKK
QNTIIVALLVKAHDCFVHECSVEGIVEVLQRCKSLNNVLTGAKSWNLIVKLLVGIGRYRE
MYYCFETLIKNDQFESLLGQFDEKHTNGLKTAIISYLHEHCPAQKEFFRLAALHFLMYKE
IAEMWETEAKSSIAKVLSVYELRNPTTTANASPKICMPRLICDPLAFSELNSALEAYTHA
TENYLLDNKLNLAQKIASNAELVALQLCLIEQAKAERTNSGEDSRTCISVLNIKKDEKGS
NLAYFVNTALSVPQALIISRTYEYEINWTQALYQHYIVNGSTPYLEDYLDRMPLTDEMVE
SLVKTFQLEPCVTPEMERAIATLVEMVETVTLKYRLASLLGLKRTVHELINENSFYYLKD
CDYGRSESVSMGS
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaaacggtgcgacaacccgcgcgagcctacccgagagtgattaagttcatt
caacaacgccgccactatcaatacgtagtcctattaatagagtttttttttgtactgctt
ccagaaacggaaatctctccgctgctggacaagcacgccgtttggggatatctgctgcgg
aacaacatcgacaacctggtcaagatctggattcagatcaacgcgtgcttgcgggcggcg
gaccagcatccggcgagctactcagcggaggtggacaagatcaagatcgacatttacgac
gatccgcggtttaatgagcggttgcggcaactgtttcggaggtgggagatcagcgacttt
atggtttcgcagctgtccggccacaagagcatgaccaagaatgaggtgttgctgaacgtg
ctggcgacttatgggaaatttgtcgagcaggagcggggtgatgcgttggtgatcttgagg
agattgtttacgacgcaaacggttgaggttaatcggggttggctggagcagaaggtgttt
tgggaggggttgacacggcatttggtggagaatcggctgtttcagctgatggatttgtcg
gtggtcagtgaggagtgtttggagcggctggcggaggacgaaaactgtgataaccggaag
gagttggagttgtttatggcacttagagggcttaaagaagatagtattagtggggaaggg
ttgctggtggtttcgaggaagagttccgagtatttgttggagacgcaggagagtttttac
gatgataatccgatcatgtttttgttcgagcactttctcgatccgagcaatgcggcgttc
ccggatgatgatcaacgtttttggaagctggctcatttgagaagtttcctggctcggctt
aaggacaacccgatatcgatcgtatcggcgaaggaattgatgaatctacacgggctacct
tgcttggagaagattcgaagcaatttgttcaaggatctggatggaacctgcgatgaagag
gaagcgagtgcaaaaaaggaagcggttctacgagaacacggccacgtgccacactttaac
cacccactgctgtgcgaaaagtactcgaccgaggtcaagctcaactacttgcactacatc
aagcagcaacgatcgtgctacgccctgtacctgttctacatggaccagctacgaagctac
gctcgaattacgccacagcaaatcaacagcgcagcaagaactgcttccgaggtcgccctc
ggacactacaacgatgccaacctggtgtcgcactgtacggccttcatcgaaatgctgggc
gtggacagctcgcgaacgcgagcatacatccggtgtctgaacatgctgaatgaaactgcc
actctcagggagatcacgaccgtcgagttgatcgagcagtgcgaaaacgtcctggagagt
agaacatggcacgatcccaacctgctgttagacctggaagcaatgaccaccgtctgtcga
gctagccaactgagcttcccggaaaagtatctcaagcaactcctcaacaacaacgactgg
ttccgcttcctgcttctcgtcgaatacctagactacccgcaagagcaaatcctagccctg
agcaaatccagcttccaaaacgccaccatcggcagcaacgtgatgcgcgccatcaagtac
cacaccgagtcggcgggttcactgcgccgcgaatcaacgccaacctccctcaagaagcgc
aacagctggacgccaaagaagcgacgacggggcagcagcattagcaacgccggcggcgac
agccattcgagcgtatcgagcgagagtgacatccagtccagcactacgacgacgaccacg
accaacaggcgccactcgaccattagcgagtcttcgcttggtggtgggttggactacgac
ggatcgcgctacctcgccgagcggtacgatcgtgaccttttcgccacggtgctgctgtgc
tcgaatgaggccgatacgctgcggtcaagccggtgcgcgctggattttgacgggtttaga
cagctgatgctgggacggaagcagggcgggacgtttgggaatctgttggatcgtgccgtg
gcgagacgatggccgctgttggcggttctggcgggaatggtagcggagagcaatcgcaag
tactgttgggtcacctggttgatggtttcgatcagctatccgttctatgagaaacttaag
gaactatccgaggtcgagttcctgcaagatttgctcgagttcagcgttcagaaaggttac
gtccagatattgcaggactcggttagcttattctaccccgattcaaacctgtgtaacttg
accaaatatttcatcaacactacaaagttggacttttcccaaatcacaaccgatcacttg
cgacatttcttgctaaaagtcaacgattgtccgctactcggactaaagaaactggagatg
atcgcgttcggggtcaaactgctcaccctgcacgtagataacaacttcagctcgctctac
cagcaaacctgcatgctggagacgctcgtctcctcagacatcaactgcttcacacagaaa
atcgactttgtccgactgctcaagttctgcaacatcctgaaacccacaacggtgaggatc
gcattcatcaacttcttcgatcgcgaagacctgcgccaacaatttgaagccctctgcgag
cagctcgtctcgcacaaaaactacacgcaagccatcgagatcgccgagctgtccgccctc
cctcgcgactcgatcatcttcgagcactggatcagcgactttgaaaccgacgaggagtgc
gacttttcccagtaccaatcagacatgacccgctacgacgtcggtccggagctcctcctg
aacttcttcatccacatcgcgaaccgactcgagtacggcaaccggacaaagtacgacctc
ctaaagcgagctctcgagctcatcaaacagcacggtctctacccgagtcaactgtacgat
cgcgatcgtcttgagtacgagctggccctagcatacgtgaaatgttccgagaacccctcc
acgctacccctctaccactcgcacttcttcagcaacacgctcaagcgcgacggtggcatc
ctctaccacaccttcatggagctcaaagaggtagccgggatcgacgatctgaccgtttcg
aatcttccgctggaacaccccacggaacgatcgcgtctcgatggcctgatccaccgactg
ctcaaagaaggcgacatcgtgcaagccctacgctaccaggcaatcttcgagcagcgtccg
tatgatctgcattttgtggtgttctgcatgggactcgccgagtccgtgctcagcttgtac
aacctgtccaaagaggaacgcctcatgctgaacgaggactgcaagcgggtatcgctgcac
atgcagcgtagaacactgcgcttgagccggatgagtcagtgctcggcgaatacctcctcc
ataggatcgccggcgcgactcgagtcgtcggacacgagtgcgggagcttccgagttcgag
gaggttccctcgcgggaacggcagaacgtgctggaggcgatcaatggtctcggcgccaag
atccagtacggacaagacctcgcccagcgggtcatcctaacctaccggatagcgatgtac
ctcgatcgcgagtacaacgagatcctcaaaatccgcgatcccgtcggcttcctggaggaa
gtgatccgcgaggactgcttcaacaaactggaagtgatcagcgacattatgacttcgcac
cggatgagtgatgccacaatttcacggtttctagcccgggagatcgtcaccgctgtggtc
agatccaagttctacatgcttcagcaaggttcgccactggcgaacgcaaagccgatcgac
gaactgctctggggttataacatcgatcgagagtttcacctctttctggaactcgcgccc
aacacgaccatgctgggcaactggctgctcaagtactgcgacgcgatcaagtgctacaag
cggctggaaaagtcaccggatcgttcctccatgacggaatccgtcgtagacgacgttgaa
ccaaccctgctcgataacctcaaagagatcttcaagaaccagatcctgtcgctcaaaaag
caaaacacgatcatcgtcgcgctgctcgtcaaagcccacgactgcttcgtgcacgagtgc
tccgtcgaaggcatcgttgaagtcctgcagcggtgcaagtcactgaacaacgtgctcacc
ggcgccaagtcgtggaacttgatcgtcaaactgctcgtcggcatcggacgctaccgggag
atgtactactgcttcgagacgctcatcaagaacgatcagtttgaatcactgctggggcag
tttgacgagaagcatacgaatggcctcaagaccgcgatcatctcctacctccacgagcac
tgcccggcacaaaaggaattcttccggctggcagcacttcacttccttatgtacaaggag
attgccgaaatgtgggaaacggaagccaagtccagtatcgccaaagtcctgtcggtgtac
gagttgaggaacccgacaaccactgccaatgcgagtcccaagatctgcatgccccgactg
atttgcgacccgttggcgttctccgagcttaactccgccttggaggcgtacacgcatgct
accgagaactaccttctagacaataagctgaacttggctcagaagatcgcttcaaacgct
gaactggtagcgttacagctctgtctaatcgagcaagccaaagcagagcggaccaactcc
ggtgaagattctcgaacctgcatttcagttctgaacatcaaaaaggacgaaaagggctcg
aatctcgcgtactttgtcaacactgcactgagcgtcccgcaagccctcatcatctcgcga
acgtacgagtacgagatcaactggacgcaagccctgtatcagcactacatcgtaaacggc
tccacgccctacctggaggattacctcgaccggatgcccctcaccgacgagatggtcgaa
agtctcgtcaaaacgttccagctggagccgtgcgtgacgccggaaatggaacgcgccatt
gcgacgctcgtcgagatggtcgaaaccgtaacgctcaagtaccggctggcgtcgctgctc
ggcctcaagcggaccgtccacgagctgatcaacgagaacagtttttactacctgaaggat
tgtgactatgggaggagcgagagcgttagcatggggagctga
DBGET
integrated database retrieval system
