Capsella rubella (pink shepherd's-purse): 17885638
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Entry
17885638 CDS
T02984
Name
(RefSeq) beta-hexosaminidase 1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00511
Other glycan degradation
crb00513
Various types of N-glycan biosynthesis
crb00520
Amino sugar and nucleotide sugar metabolism
crb00531
Glycosaminoglycan degradation
crb00600
Sphingolipid metabolism
crb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crb00604
Glycosphingolipid biosynthesis - ganglio series
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
17885638
09103 Lipid metabolism
00600 Sphingolipid metabolism
17885638
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
17885638
00531 Glycosaminoglycan degradation
17885638
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
17885638
00604 Glycosphingolipid biosynthesis - ganglio series
17885638
00511 Other glycan degradation
17885638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crb03110
]
17885638
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
17885638
Chaperones and folding catalysts [BR:
crb03110
]
Intramolecular chaperones
Others
17885638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
17885638
NCBI-ProteinID:
XP_006290865
UniProt:
R0HIU2
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSLRLLLLLICISLSITSSLSSPSPADSPPYLWPLPAEFSFGNQTLSVDPAVALIVAGNG
SGSPIVRAAFERYMGIIFKHASGRASLLSRLRFLRMVEYDITSLKIVVHSGSEELQLGVD
ESYTLMVSKKNEQSIVGAATIEANTVYGALRGLETFSQLCAFDYLTKSVQIYKAPWYIQD
RPRFQYRGLLIDTSRHYLPIDVIKQIIESMSFAKLNVLHWHIVDEQSFPLEIPTYPNLWK
GAYSRWERYTVEDASEIVRFAKMRGINVMAEVDVPGHAESWGTGYPDLWPSLTCREPLDV
TKNFTFDVISGILADMRKIFPFELFHLGGDEVNTGCWKNTTHVKEWLQGRNFTTKDAYKY
FVLRAQQIAISKNWTPVNWEETFSSFGKDLDPRTVVQNWLVSDICKNATAKGFRCIFSNQ
GYWYLDHLDVPWDEVYNTEPLHGINDHSHQKLVIGGEVCMWGETADTSVVLQTIWPRAAA
AAERMWSTREAVSKGNITLTVLPRLHYFRCLLNNRGVPAAPVDNFYARRPPSGPGSCYAQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcgtcttcttctcctattgatatgcatctctttatctatcacttcgtctctg
tcatctccgtcaccggctgattctcctccttatctatggccgttgccggcggagttttcg
ttcggaaaccagaccctctcggtggatcccgccgtggctctaatcgtagctggaaatgga
agcggatcgccgattgttagagctgcgtttgagaggtatatggggataatctttaagcat
gcttctggtagagcttctctattgtcgagacttagatttctgagaatggtcgagtatgat
atcacttctttgaagatcgttgttcactctggttctgaggagcttcaattgggtgtggat
gagagttatacattaatggtttcgaagaagaatgagcaatcaattgttggagcagccacg
atcgaggctaatactgtctatggtgctcttagaggattggagacatttagccaattgtgt
gcctttgactatttaaccaaatctgtgcaaatatataaagcaccctggtatattcaagac
agacctagattccaataccgtggcctgctaatagatacgtcaagacattatttaccaatt
gatgttattaagcaaataattgaatccatgtcctttgctaaacttaatgtcctgcattgg
cacattgtagacgagcaatcatttcctcttgaaattcctacatatcctaatttgtggaaa
ggagcttattccagatgggaacgttatacagttgaggatgcttctgaaattgtcaggttt
gccaaaatgagaggcattaatgtcatggctgaagtagatgtccctggccatgcggaatca
tgggggactggataccctgatctttggccctctctgacttgccgagagccccttgacgtt
actaaaaactttacattcgatgtgatttctggcattttggcagatatgagaaagatattc
ccatttgagcttttccacttgggtggtgatgaagttaatacgggttgctggaaaaacaca
actcatgttaaagaatggcttcagggtcgcaacttcacaaccaaggatgcatataaatac
tttgtactccgagcacaacagatagctatatcgaaaaattggacacctgtcaactgggaa
gaaaccttcagttcctttggaaaagatcttgatcccaggacagtggtgcaaaattggcta
gtgtctgacatatgtaagaacgcgacagcaaaaggattcagatgcattttcagtaaccaa
ggatattggtacctcgaccatctagatgttccgtgggacgaggtttacaacaccgaacct
cttcatggaatcaacgatcattctcatcaaaagcttgtgatcggaggagaagtttgcatg
tggggtgaaacagctgatacatccgttgtccttcagactatttggccgcgtgctgcagca
gctgctgaacggatgtggagcaccagagaggctgtgtcaaaagggaacataacgttaact
gtattgccacgtctacactacttcagatgtctgctgaataaccgcggggttccagcggct
ccagtggataacttttacgcacgaagaccgccctcgggacctggctcttgctatgctcag
tga
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