Capsella rubella (pink shepherd's-purse): 17895616
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Entry
17895616 CDS
T02984
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00601
Glycosphingolipid biosynthesis - lacto and neolacto series
crb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
17895616
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
17895616
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crb01003
]
17895616
Enzymes [BR:
crb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
17895616
Glycosyltransferases [BR:
crb01003
]
Glycan extension
P blood group
17895616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Glyco_transf_8
Motif
Other DBs
NCBI-GeneID:
17895616
NCBI-ProteinID:
XP_006301196
UniProt:
R0HW88
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MEQSKRTEHVVLLQRLKRLVVSFFCCLPLSLLGLLLMLLLIYNSFCVFSFHLDTISPVKS
TLPPTQQHQFLHHHASPSLTTSSEVDSSLLLVVKETSLGFVQRQNDSSTTRTERRTRKFK
RRVESTSVITQRLQVASRQRFKTRVKSFLSKSSCESLFFMTWISSIESFGDRERFTIESL
FKFHPNSCLILVSNSFDCDRGTLILKPFIDKGLKVLPIKPDFAYIFKDTLAEKWFERLKK
GTLSPGVIPLEQNLSNLLRLVLLYKYGGIYLDTDVIVLKPLTSLHNVIGAQTVDAVTRKW
SRLNNAVLIFDKNHPLLKRFIDEFSRTFNGNKWGHNGPYLVSRVIARINIAPSSDLGFSV
LPPSAFYPVDWTRIKRFYRAPTNETEANWLRMRLTHLRKNTFAVHLWNRESKKLRIEEGS
IIHQLMSHSCIFCNSSSLHLS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagtaaaagaacagagcatgttgtgttattgcagagattgaaaagattggtc
gtctcttttttttgttgtcttcccctgtctcttctcggtctccttctcatgcttctctta
atctacaacagcttctgtgtcttctcttttcatcttgatacaatctcacctgttaaatcc
actctaccaccaactcaacaacaccagtttcttcatcatcatgcatcaccatcattaaca
acatcatctgaggttgactcttcattgttgcttgtggtgaaagaaacctctttagggttc
gtgcagaggcagaatgattcgtctacgacgaggacggagagaaggacgaggaaattcaag
agaagagtcgagtcaacttctgtgataactcagcggttacaagtcgcatcaagacagaga
ttcaagacgagggtcaagtctttcttgtcaaaatcttcttgcgagtcactcttcttcatg
acctggatctcctccatcgagtctttcggtgatcgagagcgattcaccatagagagcctc
ttcaaatttcatccaaacagctgtttgatcttggtctcaaactcatttgactgtgacaga
ggaaccctaatcttgaaaccctttatagataaagggctcaaagtgcttccaattaaacct
gactttgcttacatcttcaaagatacattagcagagaaatggtttgaaagattgaagaaa
ggaacactgagtccaggagtgattccattggagcaaaacctctccaacctcctaagatta
gtcttgctctacaaatacggagggatctacttagacacagacgttatagtcctcaaacct
ctcaccagtctccacaacgtaatcggagcacaaacagttgatgcagtcacaagaaaatgg
agcaggctcaacaatgcagtactcatctttgacaaaaaccatcctttgcttaagagattc
atcgacgagttctcgagaaccttcaacggtaacaagtggggtcacaacggtccatactta
gtgtcgagagtcattgcaagaatcaacattgccccctcctcagatttgggattctctgtt
cttccaccatctgcattttatccggtggattggactagaatcaaaagattctacagagct
cccacgaatgagaccgaggctaattggctgcggatgaggctgacgcatttacgcaaaaat
acattcgctgttcatctttggaacagagagagtaagaaacttaggattgaagaaggaagc
atcattcatcaactcatgtctcattcctgcatcttttgtaattcttcttctttacattta
agttaa
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