Crassostrea gigas (Pacific oyster): 105317946
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Entry
105317946 CDS
T03920
Name
(RefSeq) integrin beta-like protein A isoform X1
Organism
crg
Crassostrea gigas (Pacific oyster)
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Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_3
cEGF
EGF_2
EGF_CA
DL-JAG_EGF-like
PKD
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
105317946
NCBI-ProteinID:
XP_019918640
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Position
LG8:46957291..46965823
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AA seq
663 aa
AA seq
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MPGQHLLLCILLSILELPIEASHFRGGTISWKPTGNGNEVRFTFKLGWAYGGGPGCTPSN
IGQLVTGQNSSYWKCTNGCIGTVKLANTNYICTGASVSDDWEQGENTFTYTFPRIGPYTV
EFTGGNWVSLNFGRAGSWSVGTVVYLANRSDTHNKNRSPVTTGKPMYTIQYSCNATIRIP
VVDDDGDTVRCRWSTGSECVSICNALPSATIDSNTCTISFPANHASNGTYAVAISVEDYP
KSTIIIGSKVYTTGTKMSTVNLQFLVKTPSISGSCNDKPRFISPTPAQGSTIQIDILQIS
QVSFYVTNTRSITRIYITSPAGMTYTSLQSVPSQPGIVFVTTSWTPQQNQIGLHIVCALA
EDSIGKTSEARCVNVNVNDVSPCLSEPCQNNGTCVRNGLTQNYTCTCVPGFTGRFCEIDK
NECTSGPCQNGGTCLDLINKYECQCVPGYTGTQCEIDINECASNPCENQASCNDLVNFFN
CTCLPGFTGDRCHIDINECASNPCENQATFNNYVNFFNCTCLPGFTGYRCQKDINECASN
PCENQATCNDLVNFFNCTCLPGFTGDRCQKDINECEIGPCIFLFDCEDRINEYHCNLIEW
KLALIISTSVMLSLIVISVFTYSFKRKTYKDKDHTWLANFVDIHKPDVQSRVLFNRKFPF
RRF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccaggacagcatctcttgttgtgtattttattatcaattttagaactcccgatagaa
gctagtcattttagaggcggtacaataagctggaaacctactggaaatggaaatgaggta
cgttttacctttaaactaggatgggcatatggaggaggtccgggctgtaccccgagtaac
attggacaacttgttactggacaaaattcatcgtattggaaatgtaccaatggttgtatt
gggactgtaaaacttgcaaacaccaactatatatgtacaggggcaagtgtgagcgatgat
tgggaacaaggagaaaatacctttacgtatacatttcctagaattgggccctacactgtt
gagtttactggaggtaattgggtgtcgttgaattttggacgtgcgggaagttggtccgtt
ggaactgttgtttatttagcaaatcgtagtgatactcataacaagaatagaagtccagtc
actacggggaaaccaatgtatacaatccagtatagttgtaatgcaacgatacgtatcccg
gttgttgatgacgatggggacaccgttaggtgtcgctggtcgacagggtcagagtgcgtc
tctatctgtaatgcactaccgtcagcgacgattgatagtaatacctgtaccatatcattt
cccgcaaatcacgcatcaaatgggacttatgcggtcgcaatatctgtagaggactatccg
aagtccaccataattattgggtccaaggtttataccacaggtactaagatgtcgacagtt
aatttacagtttttagtaaaaacaccatctatatcaggaagttgtaacgacaagcctcgt
tttataagtccaacaccagcgcaaggttcaaccattcaaatagacattttgcagatctcc
caagtttcattctacgtcaccaataccagaagtattacaaggatatatataacctcaccg
gctggtatgacttatacctcacttcaatctgttccttcgcaacccgggattgtctttgtc
actacatcatggacgccacagcaaaaccaaataggactccacattgtttgcgctttggca
gaggactcaatagggaaaacaagtgaagcacgatgcgtcaatgtaaatgtgaacgacgta
agtccttgtttgagtgagccttgtcagaacaatggtacgtgtgttcgaaatggtctgaca
cagaactacacgtgtacatgtgtccctggattcacaggccgattttgtgaaatagataaa
aatgaatgtacaagtggaccttgtcagaatggagggacttgccttgacctgatcaacaaa
tatgaatgtcagtgtgtgcctggatatacgggaacgcaatgtgaaattgatataaatgaa
tgcgccagcaatccatgtgagaaccaggcttcatgtaatgatcttgtcaacttcttcaac
tgtacctgtctccctgggttcacaggtgaccggtgtcatatagatataaatgaatgcgcc
agcaacccatgtgagaaccaggctacatttaataattatgtcaacttcttcaactgtacc
tgtcttcctgggttcacaggttaccggtgtcaaaaagatataaatgaatgcgccagcaac
ccatgtgaaaaccaggctacatgtaatgatcttgtcaatttcttcaactgcacttgcctc
ccggggttcacaggtgacaggtgtcaaaaagatataaatgagtgcgaaatcgggccatgc
atctttctgtttgactgtgaagatcgtatcaatgagtaccattgcaatttgatagagtgg
aaacttgctctgattatttcaacttctgtgatgctgagtctgattgtcatatctgttttc
acctatagtttcaaaagaaaaacatacaaagataaggatcacacctggttggcaaatttt
gttgatatccataaacctgatgttcagtcaagagttcttttcaatagaaaatttccattc
aggcgcttttga
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