Crassostrea gigas (Pacific oyster): 105331834
Help
Entry
105331834 CDS
T03920
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg00900
Terpenoid backbone biosynthesis
crg01100
Metabolic pathways
Module
crg_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105331834
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crg01006
]
105331834
Enzymes [BR:
crg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105331834
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105331834
2.5.1.29 geranylgeranyl diphosphate synthase
105331834
Prenyltransferases [BR:
crg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105331834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
FadR_C
Motif
Other DBs
NCBI-GeneID:
105331834
NCBI-ProteinID:
XP_034311185
LinkDB
All DBs
Position
LG10:51676967..51684291
Genome browser
AA seq
299 aa
AA seq
DB search
MSEKQDVNEKVLLEPYSYICQIPGKKVRTKLSAAFNCWLQIPEEKLKLIGEVTQMLHNAS
LLIDDIEDNSNLRRGIPVAHNIYGVPQTINSANYVYFLGLEKVLQLDHPESTKVFTAQLL
ELHRGQGMDIYWRDAVVCPTEEEYKAMVIKKTGGLFGLAVGLMQLFSDCKKDFVPLLNAL
GLYFQIRDDYANLYSKEYEANKSYCEDLTEGKFSFPIIHAIRSSKDDTQVINILRQRTTD
NDVKKYCVECLHRLGSFEYTKEILIQLENSIFELIEEHGGNPILTALINELKKVYRGSQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaacaagatgtcaatgaaaaagtgctactggagccctacagctacatatgc
cagattccagggaagaaagtcaggaccaagctatcagcagcttttaactgttggcttcaa
atacctgaggagaagttaaaactgataggggaggttactcagatgctgcataatgcaagt
ttattaattgatgacattgaggataattcaaatttaagaagaggcataccagttgctcac
aatatatatggagtgccacagactataaattctgccaattatgtttacttcctgggttta
gaaaaagttcttcagctggaccatccagagagcacaaaagtttttacagctcagctattg
gaactgcatcgtgggcaaggtatggacatctactggagagatgcagtggtgtgtcccaca
gaggaggagtacaaggccatggttataaaaaaaactggaggactatttggtttagctgtt
ggattaatgcaactctttagtgactgtaaaaaagattttgttccactattaaatgctcta
ggcttgtatttccaaatacgagatgattatgctaatctgtactctaaagagtatgaagcc
aacaagagttactgcgaggacctgacagagggcaagttttccttccccatcatccacgcc
atcagaagcagtaaggatgacacacaggtcataaatatattgagacagcgaactacagac
aatgatgtcaagaagtactgtgtagagtgtctacatcgactaggctcttttgaatacact
aaagaaatcttaatacaattggaaaacagcatttttgagctgatagaagaacatgggggt
aatcctatactgacagcattaattaatgaactgaagaaagtatacagaggatctcaatga
DBGET
integrated database retrieval system
