Crassostrea gigas (Pacific oyster): 105348811
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Entry
105348811 CDS
T03920
Name
(RefSeq) laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105348811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Fib_alpha
DASH_Dam1
Motif
Other DBs
NCBI-GeneID:
105348811
NCBI-ProteinID:
XP_034317836
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MDSSLFYKLFVVIFMIRGSFSQRQPRCEQGSCYPATGDLLIGRENNLTASSTCGLTRPEN
YCIVSHLEEDTKCFTCDSRQPWSEYQRNSHRVNNIVSSFRERKLRWWQAENGKQFVSIQL
DLEAEFHFTHLIMRFRTFRPKALLIERSYDFGKTWKVYRYFAQRCEDSWPGVKRWPPRDL
KEVICDDRYSDEVPSTEGEVIFRVLPPFIRIENPYNEEVQDLLKLTNLRVNFTELHGLGD
TLLDNRQEIKDKYYYAMYDMTVRGSCSCYGHASRCEPVDGYNNRPDMVHGQCVCTHNTKG
RNCEQCQDFYNDLPWRPARQNASNACKKCNCNGHSDRCKFDPAVYEANGGISGGVCLDCQ
HNTMGRNCQQCTDMFYQDPYQDIRSSTICKPCDCDPSGSLLGGRCDDHSDERNGLVAGRC
HCKDHVEGKRCDTCKDGFYNLDESNQQGCEACDCSMIGTVTNSSCDKDSGMCLCKRYVTG
ERCDTCYHGFYGLSDIDTGCTPCDCDVGGSISEACDQTTGACTCKPNIIGKQCNEPRPGY
YYAMLDYLLYEAELAKGFGQARQYIQEPYADGYQPWTGPGYMLVREGDSLEFSIDNIEFP
TNYDIVIRYDLRMPEVWEDVKVTIRRDKIPDENGPCANHLPRDDDKSTTLNQGSRYVEVT
PSACLEPNTNYTIRLDFRRYKSGLSTPDATALIDSIVLVPATDSIPIFQVFGYLNFMKNE
FLRYRCREKQLTPYRPNYPEFCKKLTFSISTSMLHRALPCECDPTGSLNSECEPAGGQCL
CKPNVVGRKCDRCAPGTYNFGPAGCSACNCHEYGSRDNLCDAQTGQCLCIYNVGSRDCSQ
CEAGYWGFPQCRACDCNGNAETCDDLTGRCIACLNNTAGDHCESCDAGYYGDPRSYVRKP
CRPCMCPGGPTSLTQHADSCSEDPRQEVIICNCLPGYQGPNCDTCAENYFGNPLVANSTC
EPCLCNNNIDPNVDGSCDTSSGECLKCLFNTEGFSCEKCKPGYYGDATTQSCVECVCDPY
GSDRSAGSCDRETGQCPCLPNVTGLRCDACLAGYWNITSGEGCSACGCDPEGSLGITCNQ
FDGQCDCQQERGGRDCSQCEDLYWGDPKDQCTACDCNGQGSADMQCDRRTGQCVCLTGIS
GYKCDRCDRGTTGELPNCKPCGECFDNWDRVIRDLRDQTQYLVNEALKIKATGVEKAFEK
EFAEMENNIQEIRDIIRNANVSSNDIRDIEMNLKQLRESLNISYTDLERTKEEIDVRSNS
IRQGNNDIRALQMGVDKLKQKIENLKRNATNVQAQDVEGAFNLTKKAQEVSMAAQRKVDA
TDIILEQSETTRKEVNAMVESQHQEFDRKVAENSKNLKEVTDQINGLGDKITDINEMVCD
KRGEPCHSVCGGGGCGVCGGEQSCGDGAVKKAENALDLARQAEELLKIKERNATELLQKL
QNSQRGAEMGKDEAQMAYNEALKAKNQTEYARTALQDLFVRISGFLSADGATPNDIKSIA
EEVLAMSISLTPDQILDLAQKINITIQGLQNIDDILAETSSDLARAKGLKDRAETAEADA
KSILEKAEDVQANLKGATDAQQAAQVAIAQADKDIGDAEQDLTQIESETAAATDKSNQSL
KSLGYLRARLQELKEKFIENEQRVDNAEMAAQEANKLALRAEEAANQLQNKYTTTAQDLN
LRYNLTTQAQSRAETLKRRADKLATDTTAKLKKLKDMQENFNANEKRLNKLSTDIDELNR
RMSEYLQAINDKATNYYNCKT
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagtttattctacaaactcttcgtagttatttttatgattagagggtctttc
tcccagaggcagccaagatgcgagcagggcagctgttaccccgcgaccggagatctcctg
atcgggagggagaataacctgaccgcctcctctacctgtggcctgacacggcccgagaac
tactgcatcgtcagtcacttggaggaggacaccaagtgtttcacctgcgactcgcggcag
ccctggtccgaataccagcgcaacagtcaccgcgtgaacaacatcgtgtcctcgttccgc
gagaggaagctgcggtggtggcaggccgaaaatggcaagcagtttgtgtccatccagcta
gatctggaggcggagtttcatttcactcacttgatcatgaggttcaggaccttccgacca
aaggccctcttgatcgagcggtcctatgattttggaaaaacgtggaaagtttatcgatat
tttgcccagcgctgtgaggactcgtggcccggggtcaagagatggccccccagggatctg
aaggaggtgatctgtgatgaccggtactcagatgaggtcccctccacagagggagaggtg
attttccgagtgctgcctccatttatcagaatcgagaatccgtacaatgaggaagtccag
gaccttctgaagctgaccaacctgagggtcaacttcacggaactccacgggctaggggac
acgctgctggacaaccgtcaggagatcaaggacaagtactactacgcgatgtacgacatg
acagtgcgcggaagctgtagttgttacggacacgcctcccggtgcgagccagtggacggc
tacaacaacagacctgacatggttcatggtcagtgtgtttgtacacacaacaccaaggga
cgtaactgtgagcagtgccaagacttctacaatgatctcccttggcgaccagcaaggcag
aatgcctctaatgcttgtaaaaagtgcaactgcaacggtcactctgacaggtgtaagttt
gacccggctgtgtacgaggcgaacggaggaatcagtggaggggtgtgtctggactgtcag
cacaacacgatggggcgcaactgtcagcagtgtaccgacatgttctaccaagacccgtat
caggacatccgcagctcaaccatctgtaaaccttgtgactgtgacccgtcgggttccctt
ttgggtgggcgctgtgatgatcactcggacgagagaaacggactggttgcagggagatgc
cactgtaaggaccacgtggagggcaagcgctgcgacacgtgtaaagatggcttctacaat
ctggatgagtctaatcagcaggggtgtgaagcctgtgactgcagtatgattgggacggtc
actaattcctcctgtgacaaggactcgggaatgtgtctgtgtaaacgatacgtcactgga
gagagatgtgacacctgttatcatggattttatggactgagtgacattgacactggttgt
acaccatgtgactgtgatgtgggtgggtcaatcagtgaggcgtgtgaccagacgacgggg
gcgtgtacttgtaaacccaacatcattggtaagcagtgtaacgagccccgcccaggatat
tactacgccatgctggattatctcctttatgaagctgaacttgccaaaggatttggacaa
gctcgtcagtacatccaggagccctacgccgacggctaccagccctggacgggaccaggg
tacatgctggttagggagggggacagcctggagttcagtatcgacaacatcgagttcccc
accaactatgacatagttatcagatatgatctaaggatgccagaagtgtgggaggatgtc
aaagttacaattcggcgggacaaaatcccagatgaaaacggtccatgtgccaaccatttg
ccacgagatgatgataaaagcaccacccttaaccaaggatcgcgatatgtggaagttaca
ccatcagcctgtctcgaacccaacactaactacaccattcgtctggacttccgtcgctac
aagtcagggttatctacccctgatgccacggccttgattgactcgattgtccttgtgcca
gccacagacagtattccaatcttccaagtttttggttacttgaacttcatgaagaatgaa
tttcttcgctacagatgtcgtgagaaacaactgaccccgtaccgacccaattacccagaa
ttctgcaagaaactcacctttagcatctcaaccagcatgcttcaccgcgccctgccctgt
gaatgtgaccccactgggtcattgaactcagagtgtgagcctgctgggggacaatgtctg
tgtaaacccaacgtggtgggcagaaagtgtgaccgctgtgccccagggacctacaacttt
gggcccgctgggtgttctgcttgtaactgccatgagtacggatctcgagacaacctttgt
gatgcccagactggtcagtgtctgtgtatctacaacgtgggatctcgtgactgtagtcag
tgtgaggccggatactggggattcccccagtgtcgggcatgcgactgtaacggaaatgca
gaaacctgtgatgacctgactgggaggtgtattgcatgccttaataacactgcaggagac
cactgtgagagttgtgatgctggttattatggtgacccaaggagttatgtcaggaagccc
tgtcgcccctgtatgtgccccgggggtcccaccagtctgacccagcatgctgactcctgt
tcagaggaccctagacaggaggtcattatctgcaactgtctgccaggatatcaaggacct
aactgtgacacatgtgcagaaaactactttgggaatcccttggtagccaacagtacatgt
gaaccctgcctttgtaacaataacattgaccccaatgtggatggtagctgtgacacatcc
tctggggagtgcctcaagtgtctgtttaacactgaagggttcagctgtgagaagtgtaag
cctggatactatggggacgcaaccacccagagctgtgtcgagtgtgtatgtgacccctat
ggttcggacaggtcagctgggtcatgtgatagagagacagggcagtgcccttgtctcccg
aatgtgaccggactaaggtgtgatgcctgtcttgccggctactggaacatcaccagtggg
gagggctgctccgcctgcgggtgtgaccctgaggggtctcttggaattacctgtaatcaa
tttgatggccagtgtgactgtcagcaggagaggggtggcagggactgcagtcagtgtgag
gacctgtactggggcgaccccaaagaccagtgtacagcctgtgactgtaatggccagggg
tcagctgacatgcagtgtgaccgccgaactggacagtgtgtgtgtctgactggaatcagt
ggttacaagtgtgaccgctgtgacagaggcaccaccggagaactacccaactgtaaaccc
tgtggggagtgctttgataactgggacagagttattagggatctcagagatcaaacccag
tatttggtcaatgaggctctgaagatcaaggctacaggagtagagaaggcatttgagaag
gagtttgctgaaatggagaacaacatccaggaaatccgagacatcattcgcaatgcaaat
gtgtcctctaatgacatcagagacattgagatgaatctcaaacaactcagggaatctctg
aatatcagctacacagatttagagaggacgaaggaggaaatagatgtaagatccaatagt
atcagacagggcaacaatgacatcagagccctacagatgggtgttgacaaactcaaacag
aaaatagagaacctgaagagaaatgccaccaatgtccaggctcaggatgtggagggtgca
ttcaacttgacaaagaaggcccaggaagtatcaatggcagctcagagaaaagtggatgca
actgacataattttagagcagtcagagacaacgagaaaagaagtgaatgcaatggtggaa
agtcagcaccaggagtttgacagaaaagtagctgagaacagtaaaaatctgaaggaagtc
acggatcagattaatggcctcggagacaaaataacagacatcaatgaaatggtgtgtgac
aagcgtggagagccctgccactctgtgtgtggaggaggtggatgtggagtgtgtggtgga
gaacagagctgtggagacggagcggtaaaaaaagcagagaacgccctggacctggcccgc
caggcagaggaactgctgaaaatcaaggagaggaatgcaacagaactcttacagaagcta
cagaactctcagagaggggcagagatgggcaaggatgaggctcagatggcttacaatgag
gcactcaaagctaagaaccagaccgagtatgctcgcacagccctccaggatctgtttgtc
aggatctcgggattcctgtcagcagatggtgccacccctaacgatatcaaatctattgca
gaggaagtgctggctatgagcatatcgctgacccccgatcagattctagatcttgcccag
aagataaacatcaccatacagggccttcagaacattgatgacattctggctgagacaagc
agtgatctcgctcgagccaaaggactcaaagaccgagcagaaacagccgaggcggatgcc
aagtccattctagagaaggcagaggatgtacaggccaacctgaaaggggctactgacgcc
caacaagctgcccaagtggccattgcacaggccgataaagacatcggagacgcagaacag
gatctcacacagattgagtcagagacagctgcagccactgacaaatccaaccagtccctg
aaatcactgggctacctgagggccaggctacaggagcttaaggagaaattcattgagaac
gaacagagagtggacaatgctgagatggcggcccaggaggccaacaaactggccctgagg
gcagaagaggcggcaaaccaacttcaaaataaatataccaccacagctcaggatctcaat
ttgagatacaatctcacaactcaggctcaatctcgtgctgagactctcaagaggagagct
gataaattggcaaccgataccacagctaagctgaaaaagttgaaagatatgcaggaaaac
ttcaatgcaaatgagaagagactgaataagctttccactgacattgatgaactcaatcga
cgaatgtcagagtatttacaagccatcaacgacaaagctacaaattattacaactgtaaa
acataa
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integrated database retrieval system