KEGG   Citrobacter rodentium: ROD_04231Help
Entry
ROD_04231         CDS       T01145                                 

Gene name
ddlA
Definition
(GenBank) D-alanine:D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
cro  Citrobacter rodentium
Pathway
cro00473  D-Alanine metabolism
cro00550  Peptidoglycan biosynthesis
cro01100  Metabolic pathways
cro01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:cro00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    ROD_04231 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    ROD_04231 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    ROD_04231 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cro01011]
    ROD_04231 (ddlA)
Enzymes [BR:cro01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     ROD_04231 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:cro01011]
 Precursor biosynthesis
  Amino acid ligase
   ROD_04231 (ddlA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATPgrasp_ST ATP-grasp_3 ATP-grasp_4 RimK NHase_alpha
Motif
Other DBs
NCBI-ProteinID: CBG87204
UniProt: D2TKW3
LinkDB All DBs
Position
complement(474479..475573)
Genome map
AA seq 364 aa AA seqDB search
MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFEVVLLGIDKQGQWHVSDAANYLLN
ADDPAHIALRPSATRLAQVPGQHEHQLIDARTATPLPTVDVIFPIVHGTLGEDGSLQGML
RVANLPFVGSDVLGSAACMDKDVTKRLLRDTGLNIAPFVTLSRANRHTFSFADIKARLGL
PLFVKPANQGSSVGVSKVTNEAQYAQAVALAFEFDHKVVVEQGIVGREIECAVLGNDRPQ
ASTCGEIVLNSDFYAYDTKYIDDNGAKVVVPATIDPQINDKIRDIAIQAYQTLGCAGMAR
VDVFLTAENEVVINEINTLPGFTNISMYPKLWQASGLSYTDLISRLIELALERHAADNAL
KTTI
NT seq 1095 nt NT seq  +upstreamnt  +downstreamnt
atggcgaaattgcgggtaggaatcgtatttggcgggaaatcagcggaacatgaggtgtct
ttgcaatcggcaaaaaatattgtcgatgccatcgacaagacccgctttgaggttgtgctg
ttaggtattgataaacaggggcagtggcacgtcagcgatgcggccaactacctgctcaac
gcggacgatcccgcgcacattgcgctgcgtccttccgccacccgtcttgcccaggtgccg
ggtcaacatgaacaccagcttattgatgcccggaccgccacgcccctgccgacagtggat
gtgatattcccaatcgtccacggtacgctgggcgaagatggttcgctacaggggatgctg
cgggtggcgaatctgccgttcgtcggttccgatgtgctgggctcggcggcttgcatggac
aaagatgtgactaaacgcctgctgcgcgacaccgggctgaatattgcgccattcgtgact
ctcagccgggccaatcgccatacttttagctttgccgatataaaagcgcgtctcggcctg
ccgctgttcgtgaagccagccaaccagggctcttccgtcggtgtcagtaaagtgaccaac
gaggcgcagtacgcccaggccgtcgcgctggcgttcgaattcgatcataaggtagtggta
gaacaagggatcgtcgggcgcgaaattgaatgcgcggtgctgggtaacgatcgtccacag
gccagtacctgcggcgaaatcgtgctgaacagcgatttttacgcttacgacaccaaatac
atcgacgataacggtgcgaaagtggtggtgcctgcgacgatcgatccgcagatcaacgac
aagatccgtgatattgccatccaggcttaccagacgctgggctgtgccggtatggcgcgc
gtcgatgtctttttgaccgcggaaaatgaagtggtgatcaatgagatcaacacgctgccg
ggctttaccaacatcagtatgtacccgaaactctggcaggccagcgggttaagctatacc
gatctgatcagccgtttgattgaactggcgctggagcgacacgctgcggataacgcgctg
aaaacgacaatctaa

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