Citrobacter rodentium: ROD_06511
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Entry
ROD_06511 CDS
T01145
Symbol
rlpA
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
ROD_06511 (rlpA)
Enzymes [BR:
cro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ROD_06511 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cro01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ROD_06511 (rlpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
CBG87426
UniProt:
D2TNF7
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All DBs
Position
complement(711952..713055)
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AA seq
367 aa
AA seq
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MRKQLPGVCVAAGIMLLAACTSDEGQQQPTQPPLPAVCNGPVVEISGAEPRYEPLNATAN
QDYQRDGKSYRIVQDPSRFSQAGLAAIYDAEPGSNLTASGEMFDPMQLTAAHPTLPIPSY
ARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLS
GPGMACTTVAKQTYALPARPDLSGGMGSASPTPQPAQPQGDIRPISNATLKSEDSAGAPV
NSSGFLGAPTTLAPGVLEGSEPTPAPQPPAAVPVTAPVSAPAATPAPVAASTSGGYVVQV
GAVSDQGRAQQYQERLAQQFSVPGRVTQNGAVWRIQLGPFASKAEASALQQRLQTEAQLQ
SFITGAQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagcagttgcctggagtctgcgtcgcagcaggaataatgctgctcgcagcatgt
acaagtgatgaaggtcagcagcagccgacccagccgccgctgcctgcggtatgtaatggt
cctgtcgttgaaatcagcggcgcggaaccgcgttatgaaccgcttaacgccaccgctaat
caggattaccagcgagacggtaaaagttacaggattgtccaggatccctcgcgcttcagt
caggcagggctggcggcaatttatgacgccgaaccgggcagcaatctgaccgcctccggc
gaaatgttcgatccgatgcagttgaccgcggcgcatcctaccttacccatcccgagctat
gcgcgtatcaccaaccttgccaatggccggatgatcgtggtgcggattaacgatcgcggc
ccctacggcaacgatcgggtgatttcgctgtcgcgcgccgccgccgatcgtctgaacacc
tccaataacactaaagtccgcattgacccgattattgtcgcgcaggatggctcgctctcg
ggtccggggatggcctgcaccaccgtggcgaaacagacttacgccctgcccgcccgtcct
gatctgagcggcggaatgggcagcgcttcgccgactccccagcctgcgcagccgcagggc
gatattcgccccatcagcaacgccacgctgaaaagcgaagacagcgcgggcgcgccggtt
aacagcagcggcttcctcggcgcgccgacgaccctagcgccgggcgtactggaaggcagc
gaacctacgcccgcgccgcagcctcctgccgccgtaccggtaaccgcgccggtgagcgcg
ccagcggcgacgccagcgcccgtcgcggcgtcgaccagcggcggttacgtggtgcaggtt
ggcgccgtcagcgaccagggacgcgctcagcagtatcaggagcgtttagcgcagcagttt
agcgtaccggggcgggtaacccagaacggcgcagtatggcgtattcaactgggtcctttc
gccagcaaagcggaggccagcgccctgcaacagcgtttacaaaccgaagcccaactgcag
tcattcattaccggcgcgcaataa
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