Citrobacter rodentium: ROD_24201
Help
Entry
ROD_24201 CDS
T01145
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cro
Citrobacter rodentium
Pathway
cro00300
Lysine biosynthesis
cro01100
Metabolic pathways
cro01120
Microbial metabolism in diverse environments
cro01230
Biosynthesis of amino acids
Module
cro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROD_24201 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cro01002
]
ROD_24201 (dapE)
Enzymes [BR:
cro01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ROD_24201 (dapE)
Peptidases and inhibitors [BR:
cro01002
]
Metallo peptidases
Family M20
ROD_24201 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Nitrate_red_del
Motif
Other DBs
NCBI-ProteinID:
CBG89165
UniProt:
D2TTA6
LinkDB
All DBs
Position
2546681..2547808
Genome browser
AA seq
375 aa
AA seq
DB search
MSCPVIELTQQLIRRPSLSPDDAGCQALMIERLRAIGFTVERMDFADTQNFWAWRGQGET
LAFAGHTDVVPAGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPD
HKGRLAFLITSDEEASAKDGTVKVVEALMARNERLDYCLVGEPSSTEVVGDVVKNGRRGS
LTCNLTIHGVQGHVAYPHLADNPVHRAAPMLNELVGIEWDQGNAFFPATSMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDEIIKQRVHALLEKHQLRYTVEWWLSGQPFLTARGKL
VDAVVNAIEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ
LLARMYQRIMEQLVA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcccggttattgagctgacacagcagcttattcgccgcccttccctgagcccg
gacgatgcgggatgtcaggcattaatgattgaacgcctgcgcgccatcggttttaccgtt
gagcgcatggattttgccgatacgcagaatttttgggcatggcgcggacaaggcgaaacg
ttagccttcgccggtcataccgacgtggtgccggcaggcgatgccgatcgctggattaat
ccgcctttcgaaccgacaatccgcgacggaatgctgtttggacgcggcgcagccgatatg
aaaggctcgctggcggcgatggtggtggcggcggaacgctttgttgcgcagcatcccgac
cataaagggcggctggccttcctgattacttcggatgaagaggccagcgcgaaagacggc
accgtgaaggtggttgaagcgttgatggcgcgcaatgagcgtctggactactgcctggtg
ggcgaaccgtcgagcaccgaagtggtcggcgacgtagtgaaaaatggccgccgcggttcg
ctgacctgcaacctgacgattcacggtgtgcaggggcatgtcgcctatccgcatctggcg
gataacccggtgcatcgcgcagcgccgatgcttaacgagctggtaggcattgagtgggat
caggggaatgcatttttcccggccaccagtatgcaaatcgccaatatccaggcgggcacc
ggcagcaacaacgttatccccggcgaactgttcgtgcagttcaacttccgcttcagtacc
gaactgaccgacgaaataattaaacagcgggttcacgccctgctggaaaaacatcagttg
cgctacaccgtagagtggtggctctccggccagccgttcctgacggcgcgcggtaagctg
gttgatgccgtggtcaatgcgattgagcactataatgaaattaaaccgcagttactgacc
actggcggcacgtctgacggacgatttattgcccgtatgggggcgcaggtcgttgagctc
ggtccggtaaacgccacaattcataaaattaatgaatgtgtgaacgccgccgatctgcaa
ctgcttgcccgtatgtatcaacgaattatggaacaactcgtcgcctga
DBGET
integrated database retrieval system
