Citrobacter rodentium: ROD_32241
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Entry
ROD_32241 CDS
T01145
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cro
Citrobacter rodentium
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cro03019
]
ROD_32241 (orn)
03009 Ribosome biogenesis [BR:
cro03009
]
ROD_32241 (orn)
Messenger RNA biogenesis [BR:
cro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ROD_32241 (orn)
Ribosome biogenesis [BR:
cro03009
]
Eukaryotic type
Pre-60S particles
RNases
ROD_32241 (orn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CBG89944
UniProt:
D2TMC1
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All DBs
Position
3402863..3403408
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTASGLVERVKASTMGDREAELATIEFLKAWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctgatttggattgatcttgagatgaccggtctggatccc
gagcgcgatcgcataattgaaatcgccacgctggtcaccgacgctaatctcaatatactg
gcggaagggccgaccatcgcggtgcatcagtccgatgcgcagctggcgttaatggatgac
tggaacgtgcgtacccacaccgccagcgggctggtggagcgggtgaaggcgagtacgatg
ggcgatcgcgaagccgaactggcgactatcgaatttctgaaggcgtgggttccggcgggc
aagtcgccgatatgcggaaacagcatcggtcaggacaggcgttttctgtttaagtatatg
ccggagctggaggcatatttccactaccgttatctggacgtgagcactctgaaagagctg
gcgcgtcgctggaagccggaaatcctcgccggctttaccaagcagggcacccatcaggcg
atggatgacattcgcgagtcggtggcggagctggcttactaccgcgagcattttattcag
ctttaa
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