Chromobacterium rhizoryzae: D1345_12125
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Entry
D1345_12125 CDS
T05688
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
crz
Chromobacterium rhizoryzae
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crz03019
]
D1345_12125
03009 Ribosome biogenesis [BR:
crz03009
]
D1345_12125
Messenger RNA biogenesis [BR:
crz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D1345_12125
Ribosome biogenesis [BR:
crz03009
]
Eukaryotic type
Pre-60S particles
RNases
D1345_12125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CTD1
Motif
Other DBs
NCBI-ProteinID:
AXT46897
LinkDB
All DBs
Position
complement(2659977..2660522)
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AA seq
181 aa
AA seq
DB search
MTQDQMNLIWLDMEMTGLNPETDRIIEVAMIVTDSQLNVVAESPVLVIHQPDEVLDGMDD
WNKNTHGKSGLIEKVKASTLGEAEAEQMLLDFMAQYVPPRITPMCGNTIHQDRRFMVRWM
PKLEEYFHYRNLDVSTLKELCKRWKPEVARGVVKRGKHEALADILESIEELRYYREHFLK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagatcaaatgaacctcatctggctcgacatggaaatgacgggtctgaatcct
gagaccgaccgcatcatcgaagtcgcgatgatcgttaccgacagccagctgaacgtggtg
gcggaatcgccggtgctggtgatccaccagcccgacgaggtgttggacggcatggacgac
tggaataagaacacccacggtaaaagcggcctgatcgagaaggtcaaggcctccaccttg
ggcgaagccgaggccgagcagatgctgctggacttcatggctcagtacgtgccgccgcgg
attacgccaatgtgcggcaatactatccatcaggaccgccgattcatggtgcgctggatg
cccaagctggaggagtatttccactatcgcaacctggatgtgtctacgctgaaagagctg
tgcaagcgctggaagccggaagtggcgcgcggcgtggtcaaacgcggcaaacacgaggcg
ctggcggatatcctggagtccatcgaggagttgcgttactaccgcgagcatttcctcaag
ctgtaa
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