KEGG   Chlorocebus sabaeus (green monkey): 103214778Help
Entry
103214778         CDS       T04361                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    103214778 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csab03400]
    103214778 (LIG4)
Enzymes [BR:csab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103214778 (LIG4)
DNA repair and recombination proteins [BR:csab03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103214778 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_IV DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme APG17
Motif
Other DBs
NCBI-GeneID: 103214778
NCBI-ProteinID: XP_007959053
Ensembl: ENSCSAG00000000211
UniProt: A0A0D9SA95
LinkDB All DBs
Position
3
AA seq 911 aa AA seqDB search
MAASPTSQTVASHVPFADLCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFALIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPTEGSLTPFIHNTFKTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILCSIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGDDGPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPDTYCVIAGSKNIRVKNIILSNKHDV
VKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSYEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTIYLDLYVVINDLSTKTEGTRLAI
KALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDR
CELQEENQYLI
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcaccaacttcacaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaattaaagaaactatgcttgctaagctttatattgagttgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacacccactggaactcatgga
gatgctggagactttgcattgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaacgaccttttagactcagttgccagcaataattct
gctaaaagaaaagacctgataaaaaagagccttcttcaacttataactcagagttcagcc
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgttgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacattgag
aaggatatgaaacatcagagtttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggagatgtatataaatacttctcccgaaatggatataactatactgat
cagtttggtgcttctcctactgaaggttctcttaccccattcattcataatacattcaaa
acagatatacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgatctg
caaacttgttattgtgtgtttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtatgaaattctttgtagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaatgaagtaattgatgcactgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacaacctctatccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagagtatgtcactggactaatggat
gaattggacattttaattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttttgtgtgcagtagcagaaaagccccctcctggtgagaagccatctgtgttt
catactctctctcgtgttggctctggctgcaccatgaaagaactgtatgatctgggtttg
aaactggccaagtattggaagccttttcataaaaaagctccaccaagtagcattttatgt
ggaacagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatcgtacccagtgatatgtataaaactggctgcaccttgcgttttccacga
attgagaagataagagaagacaaagagtggcatgagtgcatgaccctggacgacctagaa
caacttagggggaaagcatctggtaagctcgcatctaaacacctttatgtaggtggtgat
gatggaccacaagaaaaaaagcgaaaagctgctccaaagatgaagaaagttattggaatt
attgagcacttaaaagcacctaaccttactaacgttaacaaaatttctaatatatttgaa
gatgtggagttttgtgttatgagtggaacagatagccagccaaagcctgacctggagaac
agaattgcagaacttggtggttatatagtgcaaaatccaggcccagacacgtactgtgta
attgcagggtctaagaacatcagagtgaaaaacataattttgtcaaataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
cgctttatgattcatatgtgcccatcaaccaaagaacattttgcccgtgaatatgattgc
tatggtgatagttatttcgttgatacagatttgaaccaactgaaggaagtattctcagga
attaaaaattcttacgagcagactcctgaagaaatggcttctttgattgctgatttagaa
tatcgatattcctgggattgctctcctctcagtatgtttcgacgccacaccatttatttg
gacttgtatgttgttattaatgacctgagtaccaaaactgaggggacaaggttagctatt
aaagccttggagcttcggtttcatggagcaaaggtagtttcttgtttagctgagggagtg
tctcatgtaatcattggggaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcttaaaagaaagttgggtaactgattcaatagatagg
tgtgaattacaagaagaaaaccagtatttgatttaa

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