KEGG   Chlorocebus sabaeus (green monkey): 103231941Help
Entry
103231941         CDS       T04361                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab05034  Alcoholism
csab05165  Human papillomavirus infection
csab05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:csab00001]
 09160 Human Diseases
  09161 Cancers
   05203 Viral carcinogenesis
    103231941 (HDAC6)
  09164 Substance dependence
   05034 Alcoholism
    103231941 (HDAC6)
  09167 Infectious diseases
   05165 Human papillomavirus infection
    103231941 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:csab01009]
    103231941 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:csab03019]
    103231941 (HDAC6)
   04131 Membrane trafficking [BR:csab04131]
    103231941 (HDAC6)
   03036 Chromosome and associated proteins [BR:csab03036]
    103231941 (HDAC6)
Enzymes [BR:csab01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103231941 (HDAC6)
Protein phosphatases and associated proteins [BR:csab01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103231941 (HDAC6)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103231941 (HDAC6)
Membrane trafficking [BR:csab04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    103231941 (HDAC6)
Chromosome and associated proteins [BR:csab03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103231941 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 103231941
NCBI-ProteinID: XP_007989808
Ensembl: ENSCSAG00000013197
LinkDB All DBs
Position
X
AA seq 1257 aa AA seqDB search
MEKKGQGARVPTGRQKLGGASQGRSLRKGLRPNRGRGQASSTMTSTGQDSTTTRQRRSRQ
NPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIAGLQGMDLNL
EAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAV
LGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDAD
YIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKL
ILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL
VRSTETVEGDNMEEDNVEENEEEGPWEPPLLPILTWPVLQSRTGLVYDQSMMNHCNLWDS
HHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRE
LHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAAC
GFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGT
FFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVEDREGPSSSKLVTKKAPQP
AKPRLAERMTTREKKVLEAGMGKITSASSGEESTPGQTKSETAVVALTQDQSSEAATGGA
TLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGATLDQTTSEDAVGGATQGQ
TTSEEAVGGATLAQTTSEAAMEGATLDQTTSEKAPGGTELIQTPLASSTDHQTPPTSPVQ
GTTPQISPSTLIESLRTLELGSKSQGASESQAPGEENLLGEAAGGQDMADSMLMQGSRGL
TDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYIN
GHMLQHHGNSGHPLVLSYIDLSTWCYYCQAYVHHQALLDVKNIAHQNKFGEDMPHPH
NT seq 3774 nt NT seq  +upstreamnt  +downstreamnt
atggaaaagaaaggccagggcgctcgcgtccccacgggtcgccagaaacttggcggagcg
agccaagggcggagtttgagaaaggggctgcgtccaaaccgcggcaggggtcaagcctcc
tcaactatgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcag
aacccccaatctccccctcaggactccagtgtcacttcgaagcgaaacattaaaaaggga
gccgttccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaag
ctgggccaagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaacctt
gaggctgaagcactggctggcactggcttggtgttggatgagcagttaaatgaattccat
tgcctctgggatgacagcttcccggaaggccctgagcggctccatgccatcaaagagcaa
ctgatccaggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaag
gaagagctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtac
atgaatgagggagaactccgcgtcctagcagacacttacgactcagtttatctgcatccg
aactcatactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtc
ctgggggctgaaatccggaatggcatggccatcattaggcctcctggacatcacgcccag
cacagtcttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgct
caacagaaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaa
ggaacacagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctat
gagcagggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggc
caaggccaaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgac
tacattgctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctg
gtcctggtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgcc
actccggcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcg
ctccacacccttctgggagacccttgccccatgctggagtcacctggtgccccctgccgg
agtgcccaggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttctt
gtgagatcaactgagactgtggagggggacaacatggaggaggacaatgtagaggagaat
gaggaggaaggaccctgggagccccctttgctcccaatcctgacgtggccagtgctacag
tctcgcacagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagc
caccaccctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggc
cttgctgggcgctgcctcaccctgacaccgcgccccgccacagaggctgagctgctcacc
tgccacagtgctgagtacgtgggtcatcttcgggccacagagaaaatgaaaacccgggag
ctgcaccgtgagagttccaactttgactccatctacatctgccctagtaccttcgcctgt
gcacagcttgccactggcgctgcctgccgcctggtggaggctgtgctctcgggagaggtt
ctgaatggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgc
ggtttttgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtggg
cgtgccctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcac
atgtttgaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcacc
ttcttccccatgggggatgagggtgccagcagccagatcggccgggctgctggcacaggc
ttcaccgtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcc
tggcatcgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctca
gctggctttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggt
tatgcccacctcacccacctgctgatgggccttgccagtggccgcattatccttattcta
gagggtggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctc
cttggagacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcc
tcaatcactgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaag
gtagaagacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaacca
gccaaacctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggc
atgggaaagatcacctcggcatcatctggggaagagtccactccaggccagactaagtca
gagacagctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagcc
acactggcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacc
tcagaggaggctgtcgggggagccactccggaccagaccacctcagagaagactgtggga
ggagccactctggaccagaccacctcagaggatgctgttgggggagccacgcagggccag
actacctcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagcc
atggagggagccacactggaccagactacgtcagagaaggctccagggggcaccgagctg
atccaaactcctctagcctcaagcacagaccaccagacccccccaacctcacctgtgcag
ggaactacaccccagatatctcccagtacactgattgagagtctcaggaccttggagcta
ggcagcaaatctcagggggcctcagaatctcaggccccaggagaggagaacctactagga
gaggcagctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctc
actgatcaggccatattttatgctgtgacaccactgccctggtgtccccatttggtggca
gtatgccccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaaca
atccaagagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaat
ggccacatgctccaacaccatggaaattctggacacccgctggtcctcagctacatcgac
ctgtcaacctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtg
aagaacatcgcccaccagaacaagtttggggaggatatgccccacccacactaa

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