Chlorocebus sabaeus (green monkey): 103232864
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Entry
103232864 CDS
T04361
Symbol
CHD9
Name
(RefSeq) chromodomain helicase DNA binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csab03036
]
103232864 (CHD9)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103232864 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103232864
NCBI-ProteinID:
XP_007991419
Ensembl:
ENSCSAG00000005311
LinkDB
All DBs
Position
5:38918490..39119921
Genome browser
AA seq
2903 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQSTP
AHQKMTDFEQLNQFDSIKFHHVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVSD
GSPMWGHQTSTSISNQNGSPFHQQGHSHSMHQNKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMNVSGPHRVNVNHPPQMTNASNSQQSISMQQFSQTSTPSAH
FHKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHISPNSLLQSSAVLAPNHTNQ
TLSDFTGSNSFSPHRGIKQESTQHILNPNTSLNSNNFQILHSSHPQGNYSNSKLSPVHMN
FPDPVDSGTQMGHFNDHVETNGFPSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPHFDE
STFGQDNSSHILDHDLDRQFTSHLVTRPSDMAQTQLQSQARSWHSSFSNHQHLHDRNHLC
LQRQPPSSKKSDGSGPYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKER
GERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKDSKKTKTCSKLKEKTKIGKLIIT
LGKKQKRKNESSDEISDAEQMPQHTLKDQDSQKRRSNRQIKRKKYAEDVEGKQSEEEVKG
SMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVMIDTEEFFVKY
KNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLE
VSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDRP
PSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLY
EILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQG
RIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH
KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMEL
RKCCNHPYLIKGAEEKILGEFRDAYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHK
VLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRA
GGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRA
SLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDID
QILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGR
NSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRVEK
NLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITPT
EDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKHI
KHHCNKVLLRVRMLYYLKQEVIGSECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDAD
KSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPA
PAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQ
IQQIQPTFSVPTSVMQPIYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPD
RGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEER
ASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVS
RTDYHILRDPELSFMAAQRSYSQSKIAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKGI
ILEEMKVKSENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVLPQATGDQKSGGKSET
DRRMVAARTEPLTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHS
RSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSSEESDSDEEEAQKRAESTTHMKAYDE
ESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLK
GKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKVK
KHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTRLRELQNASETSL
VNFPKSIPVSGTSIQPTLGANGVILDNQPIVKKRRGRRKNVEGVDIFFFNRSKPPNHVSL
GLTSSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHP
GYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFA
PPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSG
IAKATAAAAAAASATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPT
GLSSGGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKPTESGTEDKKGSDSKESEGKKER
TESQSSENGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHI
PTLSQSNTFDVKNKHKNSDLGSSKSVEVKEEDSRIKDQEDKGGTEPSPLNENSTDEGSEK
ADASSGSDSTSSSSEDSDSSNED
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggcttgtcggatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaat
ttgggtgcagaatttgaaccgttgcacatagattcactgaaccatgttcaaagtactcca
gcacatcagaagatgactgattttgaacagttaaatcaatttgattcaataaaatttcac
cacgttaatcaatcttttggtagcccagctgaacatgtattatctccacactctcagttt
aattgttctccaatccacccccaaaaccaacccaatggtttgtttccagatgtatcagat
ggcagtccaatgtggggccatcagacatctactagcatttcaaatcaaaatggatctcct
tttcaccaacaaggacattcacactctatgcatcaaaataaaagctttgtggcgcaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcactacgctcacaa
caaaacagaaataatctcaacccagggcagaattctcttagccagtctaaaaattttatg
aatgtttctggtccacatagagtcaacgttaaccacccaccacaaatgactaatgcatct
aattcacaacagtctatttcaatgcagcaattttctcaaacgtcgactccttcagcacac
ttccacaagtgtagcaatcatcaagaaggaaattttaatggaccttccccaaatatgact
tcttgttctgtcagcaattcacagcaattttcttcacattattccttttccagtaatcat
atatcaccaaacagtctacttcagtcctctgcagttcttgcacctaatcatacaaatcag
actttatctgattttactggaagtaattccttttcacctcatagaggaatcaagcaagaa
tctactcagcatatcctaaaccccaatacatcattgaattcaaataatttccaaatattg
cattcatcacatcctcagggtaattatagcaattcaaaattgtctcctgtgcacatgaac
ttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcatgtagaaact
aatggctttccatctttagaagagaatttacttcatcaagtggaatctcaaactgagcca
ttcacaggacttgaccccgaggacctccttcaggagggacttcttcctcactttgatgag
tcaacattcgggcaagataattcaagtcacattttagatcatgaccttgatcggcagttt
acttcgcatcttgtaacacggccttctgatatggctcagactcagttgcaaagtcaggct
cggagttggcattcatcattttctaatcatcagcatttacatgacagaaatcacctatgt
ctacagcgacagcctccatcttccaagaagagcgatggttctgggccatatactaagttg
cagaatacccaggtgagggtcatgtctgagaagaagcagagaaaaaaggtggaatcagaa
agcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaaggagcgt
ggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcagttgaa
ggaaaagaggaaaagaaaggtagaaggatgaaatccaagccaaaggacaaagacagcaaa
aaaacaaaaacgtgttctaagttaaaagagaagacaaaaattggcaaactcattattaca
ttgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgcagaacag
atgccacagcatacattaaaagatcaagactctcaaaaaagaagatcaaatagacaaatt
aaaagaaaaaaatacgcagaagatgtagaagggaagcaatctgaagaagaggttaaaggt
tctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacaattgttt
gtggagaatccgagtgaagaagatgctgcaattgtagacaaaattctatcttctagaatt
gtaaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgtaaaatac
aagaattactcctatcttcactgtgagtgggccacagaagagcagcttttgaaagataaa
aggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacactttttt
gcagatatggaagaagaaccatttaatccagactacgttgaagtagacagagtgttagaa
gtctctttttgtgaagataaggatactggtgagcctgttatttactacttagtaaaatgg
tgctcattgccatatgaagatagtacttgggaactgaaagaagatgtagatcttgcaaaa
atagaagagtttgaacaactgcaagcttcaaggcctgacacaagacatttggaccgtcct
ccttctaatatttggaagaaaatagatcaatccagggactataaaaatggcaatcaactc
agggaatatcaactagaaggactcaactggctcttgttcaattggtacaatagacgaaac
tgcattttagcagatgaaatgggtcttggcaaaactattcaatcaattacattcctctac
gaaatccttctgactggtataagaggacctttcctgattattgctccactttctactatt
gcaaactgggagagagagtttcgtacgtggactgatattaacgttgtggtttatcatggg
agcctgattagcagacagatgatacagcaatatgagatgtacttcagggattcacagggg
cgtatcattcgaggagcttacagattccaagctatcatcaccacttttgaaatgattctt
ggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaagcacat
aggttaaaaaataaaaattgtaaactcttagagggcctgaaactcatgaatctggaacac
aaggtgcttttgactggcacacctctccaaaatacagttgaagaactatttagtcttctt
cactttcttgaacccttaaggtttccttctgaatcaacatttatgcaagaatttggggat
ctgaaaacagaggaacaggtacagaaacttcaggctatcctgaaaccaatgatgttgaga
cgattaaaagaagatgtggaaaagaagttggcacctaaagaagaaaccatcattgaagta
gaacttactaatattcaaaagaaatactaccgggctatcttggaaaagaacttttctttt
ttatccaaaggagcaggacaaactaatgtacctaacttggtcaataccatgatggagctc
aggaaatgctgtaatcatccatatcttatcaaaggtgctgaggagaaaatacttggagaa
tttagagatgcatataatccagctgcttctgattttcatcttcaagcaatgatccagtct
gctggtaaattggtccttattgataaattgcttcccaaaatgaaagccggaggtcataaa
gtgctcatcttctctcagatggttcgctgccttgacatcctagaggactatctcatacat
aaaagatatttatatgagcgaattgatggcagagtcagaggaaatcttcggcaagctgct
atagatagatttagtaaacctgattcagatagatttgtttttctcctgtgtacccgagct
ggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattctgattgg
aatcctcagaatgatcttcaggctcaagctcgttgccacagaattggacagaacaaagca
gttaaagtctacagactggtaactcgtaactcatatgagagagagatgtttgaccgagcc
agtttgaaactgggcctagataaagctgtgttacagagcatgagtggaagagaaagtaat
gttggtggtattcagcagctttccaaaaaggaaatagaagatctccttcgaagaggtgct
tatggtgccattatggaggaagaagatgaaggctctaaattctgtgaagaggatatcgat
cagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtgggtcaaca
tttgccaaggcgagttttgtggcatctggaaaccggacagatatttctttagatgatccc
aacttctggcaaaaatgggctaaaaaggcagaaatagatatagaggccatcagtggcaga
aacagcttggttattgacactccaagaattaggaagcaaacaagaccttttagtgccaca
aaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagcccaaactc
cggagaccctgtgaccgttccaatggctatggaagaaccgaatgctttagagttgagaaa
aacctgctagtttatgggtggggccgatggagagagattctatctcatggccgtttcaaa
aggcagctaaatgaacacgatgtagagataatttgccgagccctcttagcatattgcctt
gttcactaccgaggagatgagaagattaaaggtttcatatgggatctcattactccaact
gaagatggacagacacgagagctacagaatcatctgggcctatcagctcctgtacccagg
ggtcgaaaagggaagaaagtaaaaactcaaacaagctcatttgatatacaaaaagcagaa
tggcttcgaaaatataatcccgagcagctgcttcaagatgaaggctacaaaaaacatata
aaacaccactgtaataaggttttgcttcgtgtgagaatgctgtattatctaaagcaagaa
gttattggaagtgagtgtcagaaagtatttgatggagttgatgcaagtgacattgatgtt
tgggtaccagaaccagaccactcagaagttcctgcggagtggtgggattttgatgctgat
aagtcactccttattggagtttttaaacatggatatgaaaaatataacactattcgagca
gacccagcattatgcttcttggaaagagtgggaaaacctgatgacaaagcagttgctgct
gaacagagagcgaatgattatatggatggggatgtggaagatccagaatacaaacctgcc
ccagccatctttaaagatgatatagaggatgatgtttcctcaccaggagatcttgttata
gcagatggagatggtcaactgatggagggtgataaagtatattggcctactcagtcagct
ttaaccacacgtttgaggcgtctcatcactgcataccagcgtactaataaaaacagacaa
attcaacagatacaaccaactttctcagtgcctaccagtgtaatgcagcctatttatgag
gaagccactcttaatcctaaaatggcagccaagatagaaagacagcaaagatggacaaga
agagaagaagctgacttttatagggttgtatctacatttggagtcgtttttgaccctgac
agaggccagtttgattggacaaaatttagagctatggctaggctacataagaaaactgat
gatagtttggaaaaatatttgtatgcattcatgtccatgtgtcggagggtttgtcgtctt
ccttccaaagaagaattggtggatccaaatatttttatccagcccatcacagaagaacgt
gcttctaggactttgtatcgcattgaacttctaaggaaagtacgggaacaggcccttcga
catccacagttgtttgaacgcttaaagctttgtcatccaaatccagatttaccagtctgg
tgggaatgtggccctcatgatagggacttgcttattggtgctgccaaacatggggtgagc
cgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcagaggagc
tacagtcaaagtaagatagctcattcaaggacttctaccccacttttacagcaatatcaa
gtagcactttctgcttctcctcttacctctctacctaggctcctagatgctaaaggtatt
attctagaggagatgaaagttaaaagtgaaaaccttaaagaggagcctcagtcttctgaa
gaagaatctatgtcttctgtggaaaccaggacactaataaaatctgaacctgtaagtcca
aagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaagtgaaaca
gacagacgcatggttgcagccagaacggaacctctaactccaaacccagcttctaagaaa
ccaagagtccacaaaagaggatcggaatccagctctgattctgactcagattctgagaga
tcatcctgttcttccagatcatcttcttcctcatcgtcctcctcttcttgctcccactct
cgatcaggctctagttcttcttcatcttcatcttgttcttcagcatcttcttcatcctcc
tcctctacctcttcctcctcctcctcctcctcttcatcttcatcagaagaaagcgacagt
gatgaagaggaagcccaaaaacgagcagaaagtactactcacatgaaagcctatgatgaa
gaaagcgtcgcatcactgagcactacgcaagatgagactcaggatagttttcagatgaac
aatgggacaccagagtctgcttacatcttacaaggtggatatatgctggcagcctcatat
tggccaaaggaccgtgtgatgatcaataggttggacagtatttgtcaaacagttctgaaa
ggaaagtggccttcagctagaagaagttacgatgctaacacagtggcttctttctatacc
acaaaactgctggacagccctggagcagctacagaatacagtgagcccagtgtacccact
cccccaggtgccggtgttaaagaagaacatgatcagtcaacacagatgtcaaaggtgaag
aagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaagttg
acatttcagaagcaagggcttgctcagaaaagaccatttgatggtgaagatggtgctctg
gggcagcagcagtacctcactcggcttcgagagcttcaaaatgcatcagagaccagcctc
gtcaatttcccaaaatccataccagtatcaggtacttccattcaaccaacccttggtgcc
aatggtgtgatattagacaaccagcctatagtcaaaaaaaggcgaggaaggaggaagaat
gtagaaggtgttgacatcttcttttttaacagaagtaaaccacctaatcatgtttcttta
ggcttaacctcctcacagatctccacagggataaatccagcactatcctatactcagcct
caaggaattcctgatacagaaagtccagttccagttattaatcttaaagatggaacaaga
cttgcaggagatgatgcaccaaagagaaaggatttggaaaaatggcttaaggagcaccca
ggttatgtggaagatttgggagcttttattcctagaatgcagcttcatgagggaaggccc
aaacaaaaaagacaccgttgcagaaaccccaataaactagatgtgaatagtctcactgga
gaagaacgtgttcaactgattaacagaagaaatgctagaaaggttggaggtgcatttgct
ccccctttgaaagatttatgtagattcctaaaagaaaattcagaatatggagtagctcct
gaatggggagatgttgttaagcaatctggatttcttccagaaagcatgtatgaacgtatt
ctcactggtcccgtggtgagagaggaagtaagcaggcgggggagacggcccaaaagtgga
attgcaaaggccacagcagcagcagcagctgctgcatctgccaccagtgtttcaggcaat
cctttgttagccaatggattacttccaggtgtggatctcacaactcttcaggccttacaa
caaaacctacaaaacttgcagtcactgcaagtaactgcagggttgatgggaatgcctact
ggcctttcttctggaggagaagctaaaaacatggctgctatgttccccatgctgctgtca
ggaatggctggattaccaaatctattgggcatgggaggactcctgacaaagcctacggaa
tctgggacagaagacaaaaagggaagtgactctaaggagtcagaaggaaaaaaagaaagg
acagagagccaaagttcagagaatggtggagaaaactctgtgtcaagttctccttccacg
tcctctactgctgcattaaatacagctgcagctgccaacccattagctcttaacccacta
ttactatctaatatactttatccagggatgcttctcactccaggccttaatcttcatatt
ccaactttgtcccagtccaatacttttgatgtaaaaaacaaacacaaaaacagtgactta
ggctcatctaagtctgtagaagtaaaggaagaagattccagaattaaagatcaggaagac
aaaggaggaactgaaccaagtcctctcaatgaaaacagcacagatgagggttcagagaaa
gctgatgcttcatctggatctgatagtacatcatcgtcatctgaggattcagattctagt
aatgaagactga
DBGET
integrated database retrieval system
