KEGG   Chlorocebus sabaeus (green monkey): 103247223Help
Entry
103247223         CDS       T04361                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab00310  Lysine degradation
csab04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:csab00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    103247223 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    103247223 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csab03036]
    103247223 (SETDB1)
Enzymes [BR:csab01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     103247223 (SETDB1)
Chromosome and associated proteins [BR:csab03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     103247223 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103247223 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor Chromo
Motif
Other DBs
NCBI-GeneID: 103247223
NCBI-ProteinID: XP_008017513
Ensembl: ENSCSAG00000018034
LinkDB All DBs
Position
20
AA seq 1262 aa AA seqDB search
MSSLPGCIGLDAATATVESEEIAELQQAVVEELGISMEELRHFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRFLNFPEVPVSLLHSLEFFSSIGDAGSRTPKDQK
LREAMAALRKSAQDVQKFMDAVNKKSSSQDLHKGTLSQMSGELSKDGDLIVSMRILGKKR
TKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLSGNHIAYDYHPPADKLFVGSRVVAKYK
DGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISC
RDFIEEYVTAYPNRPMVLLKSGQLIKTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIY
RGSTRLEPMFSMKTSSASALEKKQGQLRTRPNMGAVRSKGPVVQYTQDLTGTGTQFKPVE
PPQPTAPPAPPFPPAPPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSP
ALSENVSGGKPGINQTYRSPLGSTASAPAPSAPPAPPAPPAFHGMLERAPAEPSYRAPME
KLFYLPHVCSYTCLSRVRPMRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKT
PCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDV
PLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQ
ATACTPGGQINPNSGYQYKRLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFK
TQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEG
YESDAPCSSDSSGVDLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRR
QTRGQKENGLSETTSKDSHPPDLGPLHIPVPPSIPVGGCNPPSSEETPKNKVASWLSCNS
VSEGGFADSDSHSSFKTNEGGEGRAGGSRMEAEKASTSGLGIKDEGDIKQAKKEDPDDRN
KMSVVTESSRNYGYNPSPVKPEGLRRPPSKTSMHQSRRLMASAQSNPDDVLTLSSSTESE
GESGTSRKPTAGQTSATAVDSDDIQTISSGSEGDDFEDKKNMTGPMKRQVAVKSTRGFAL
KSTHGIAIKSTNMASVDKGESVPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPN
LFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGR
LL
NT seq 3789 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcccttcctgggtgcattggtttggatgcagcaacagctacagtggagtctgaa
gagatagcagagctgcaacaggcagtggttgaggaactgggtatctctatggaggaactt
cggcatttcatcgatgaggaactggagaagatggattgtgtacagcagcgcaagaagcag
ctagcagagttagagacatgggtaatacagaaggaatctgaggtggctcacgttgaccag
ctatttgatgatgcatccaggtttcttaatttcccagaagttcctgtaagtctcttacac
tcattagaattcttctcgtccataggtgatgctgggagccgaactccaaaagaccagaag
ctccgtgaagctatggctgccttaagaaagtcagctcaagatgttcagaagttcatggat
gctgtcaacaagaagagcagttcccaggatctgcataaaggaaccttgagtcagatgtct
ggagaactaagcaaagatggtgacctgatagtcagcatgcgaattctgggcaagaaaaga
actaagacatggcacaaaggcacccttattgccatccagacagttgggccggggaagaaa
tacaaggtgaaatttgacaacaaaggaaagagtctactgtcggggaaccatattgcctat
gattaccaccctcctgctgacaagctgtttgtgggcagtcgggtggtcgccaaatacaaa
gatgggaatcaggtctggctctatgctggcattgtagctgagacaccaaacgtcaaaaac
aagctcaggtttctcattttctttgatgatggctatgcttcctatgtcacacagtctgaa
ctgtatcccatttgccggccactgaaaaagacttgggaggacatagaagacatctcctgc
cgtgacttcatagaggagtatgtaactgcctaccccaaccgccccatggtactgctcaag
agtggccagcttatcaagactgagtgggaaggcacatggtggaagtcccgagttgaggag
gtggatggcagcctagtcaggatcctcttcctggatgacaaaagatgtgagtggatctat
cgaggctctacacggctggagcccatgttcagcatgaaaacatcctcagcctctgcactg
gagaagaagcaaggacagctcaggacacgtccaaatatgggtgctgtgaggagcaaaggc
cctgttgtccagtacacacaggatctgaccggtactggaacccagttcaagccagtggaa
cccccacagcctacagctccacctgccccacctttcccacctgctccacctctatctccc
caagcaggtgacagtgacttggaaagccagcttgcccagtcacggaagcaggtagccaaa
aagagcacatccttccgaccaggatctgtgggctctggtcattcctcccctacgtctcct
gcactcagtgaaaatgtctctggtgggaaacctgggatcaaccagacgtatagatcacct
ttaggctccacagcctctgccccagcaccctcagcacccccagcccctccagcaccccca
gccttccatggcatgctggagcgggccccagcagagccctcctaccgtgctcccatggag
aagcttttctacttacctcatgtctgcagctatacctgtctgtctcgagtcagacctatg
aggaacgagcagtaccggggcaagaaccctctgctggtcccattactatatgacttccgg
cggatgacagcccggcgtcgagttaaccgcaagatgggctttcatgttatctataagaca
ccttgtggtctttgccttcggacaatgcaggagattgaacgctaccttttcgagactggc
tgtgacttcctcttcctggagatgttctgtttagatccatatgttcttgtggaccgaaag
tttcagccctataagcctttttactatattttggacatcacctatgggaaggaagatgtt
cccctatcctgtgtcaatgagattgacacaacccctccaccccaggtggcctacagcaag
gaacgtatcccgggcaagggtgttttcattaacacaggccctgaatttctggttggctgt
gactgcaaggatgggtgtcgggacaagtccaagtgtgcctgccatcaactaactatccag
gctacagcctgtaccccaggaggccaaatcaaccctaactctggctaccagtacaagaga
ctagaagagtgtctacccacaggggtatatgagtgtaacaaacgctgcaaatgtgaccca
aacatgtgcacaaaccggttggtacaacatggactacaagttcggctacagctattcaag
acacagaacaagggctggggtatccgctgcttggatgacattgccaaaggctcttttgtc
tgtatttatgcaggcaaaatcctgacagatgactttgcagacaaggagggtctggaaatg
ggtgatgagtactttgcaaatctggaccatatcgagagcgtggagaacttcaaagaagga
tatgagagtgatgccccctgttcctctgacagcagtggtgtagacttgaaggaccaggaa
gatggcaacagcggtacagaggaccctgaagagtccaatgatgatagctcagatgataac
ttctgtaaggatgaggacttcagcaccagttcagtgtggcggagctatgctacccggaga
cagacccggggccagaaagagaacggactctctgagacaacttccaaggactcccacccc
ccagatcttggacccctacatattcctgttcctccctcaatccctgtaggtggctgcaat
ccaccttcctctgaagagacacccaagaacaaggtggcctcatggttgagctgcaatagt
gtcagtgaaggtggttttgctgactctgatagccattcatcctttaagactaatgaaggt
ggggagggccgggctgggggaagccgaatggaggctgaaaaggcctccacctcaggacta
ggcatcaaggatgagggagacatcaagcaggccaagaaagaggaccctgatgaccgaaac
aagatgtcagtagttactgaaagctctcgaaactacggttacaatccttctcccgtgaag
cctgaaggacttcgccgcccacctagtaagactagtatgcatcaaagccgacgactcatg
gcttctgctcagtccaaccctgatgatgtcctgacactgtccagcagcacagaaagtgag
ggggaaagtgggaccagccgaaagcccactgctggtcagacttcggctacagcagttgac
agtgatgatatccagaccatctcctctggctctgaaggggatgactttgaggacaagaag
aacatgactggtccaatgaagcgtcaagtggcagtaaagtcaacccgaggctttgccctt
aaatcaacccatgggattgcaattaaatcaaccaacatggcctctgtggacaagggagag
agtgtacctgttcgtaagaacacacggcaattctacgatggcgaggaatcttgctacatc
atcgatgccaagcttgaaggcaacctgggccgctacctcaaccacagttgcagccccaac
ctgtttgtccagaatgtcttcgtggatacccatgatcttcgcttcccctgggtggccttc
tttgccagcaaaagaatccgggctgggacagaacttacttgggactacaactacgaggtg
ggcagtgtggaaggcaaggagctgctctgttgctgtggggccattgaatgcagaggacgt
cttctttag

DBGET integrated database retrieval system