Camelina sativa (false flax): 104711014
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Entry
104711014 CDS
T05044
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104711014
Enzymes [BR:
csat01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
104711014
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
104711014
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
104711014
NCBI-ProteinID:
XP_010425984
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All DBs
Position
9:14845812..14848359
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AA seq
237 aa
AA seq
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MVPRWKWKGAEAKALAEPVSETVSELQSSFARTEASGFLSTCNVLLLVEVEQAELLDRCC
FGRPVVNSEKDKRWVQLSFEEAFFLFCKLNCIKISVHGRSLEDELDLWRSMRSFKPNFAI
LYKAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLVHSIGENDRLKPWSDVHC
SVRLTGSVAKTLLVLYVNGQVNKENMNLPLCLEDYTVEELTIRRWNPELSREDESRT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggtaccaaggtggaaatggaaaggtgctgaggcaaaagcacttgcagaacctgtttca
gaaacagtctcggagctccaatcttcttttgcccgaacagaggcttcaggtttcctctca
acttgtaacgtacttctattggttgaggtagagcaagctgagcttttggaccgttgttgt
tttggtagacctgttgttaatagcgagaaagataagagatgggttcaattatcttttgaa
gaagctttctttttgttctgcaaactcaactgcatcaagatatctgttcatggtcgttcc
cttgaagacgagttagatctatggcgatccatgagatcatttaagcctaattttgcgatc
ttgtacaaggcttattcccatcttagatcaaagaactggattgtaagatcagggttacaa
tacggagttgatttcgtggtctatagacatcatccatctcttgtccattctgaatacgct
gttcttgttcattccattggagagaatgaccggttaaagccgtggtccgatgttcattgc
agtgttcggctaactggtagcgtcgcgaaaacattgttggttctttacgtcaatggacaa
gtcaataaagagaacatgaacctgcctttgtgtttagaagactacacagtggaagagcta
acaattcgtagatggaatccagaacttagccgtgaagatgaaagcagaacatga
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