Camelina sativa (false flax): 104728483
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Entry
104728483 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104728483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104728483
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104728483
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104728483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DZR
zf-RING_2
PHD_4
Motif
Other DBs
NCBI-GeneID:
104728483
NCBI-ProteinID:
XP_010445758
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All DBs
Position
2:17899264..17900977
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AA seq
314 aa
AA seq
DB search
MVLMETDTIECAIDNDEIHLNNNNNKFSSTKSQGGATVVISPATSVHELLECPVCTNSMY
PPIHQCHNGHTLCSTCKTRVNNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEI
FPYYSKLKHESLCNFRPFSCPYAGSDCPVVGDNTFLVAHLRDDHKVDMHTGCTFNHRYVK
SNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEEDARNYTYSLEV
GGSGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ
QGPDSGVCIPNLSL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatggagacagatactatcgaatgcgcgatcgataacgatgagattcatctc
aacaacaacaacaacaaattctcatcaaccaagtctcagggaggagccaccgttgtaatc
tctccggcgactagcgttcacgagctccttgaatgccctgtctgcactaattctatgtac
cctcctattcatcagtgtcataatggacatacgttatgttcgacctgtaaaacaagggtg
aacaatcggtgtccgacgtgtagacaagagcttggtgatattagatgtttggctcttgag
aaagtagctgagtcgcttgagctaccttgcaagttttacaatcttggttgccctgagata
ttcccttattacagcaaacttaagcatgagtctctctgtaacttcagaccttttagttgt
ccctatgctggctcggattgtcctgttgttggggataacactttccttgtagctcattta
agggatgatcataaagtcgatatgcatactggatgtacgtttaatcaccgttatgtcaaa
tccaatccacgagaagttgagaacgctacttggatgcttacggtttttcattgtttcgga
caatacttttgtcttcattttgaagcgtttcagctcggtatggctccagtgtacatggcg
tttctgagattcatgggtgatgaagaagacgcacgaaactatacatacagtttagaagtt
ggaggcagtgggagaaaactcacatgggaaggaacaccaagaagcatcagagatagtcac
aggaaagtcagagacagtcacgacggtcttataatccaaagaaacatggcactcttcttc
tccggtggagaaaggaaagagctgaaacttagagtcaccggaagaatctggaaagagcaa
cagggtcccgattctggtgtttgcataccaaacttgtctctgtag
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