Camelina sativa (false flax): 104729579
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Entry
104729579 CDS
T05044
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104729579
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104729579
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104729579
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
zf-GRF
Motif
Other DBs
NCBI-GeneID:
104729579
NCBI-ProteinID:
XP_010446834
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Position
12:2121221..2124257
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AA seq
602 aa
AA seq
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MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS
CTRTCEKGRTGYSGVATFCRVKSASLSCEIALPVAAEEGITGLVSGNSRLGKIETSVIAE
GLEEYEKDELLRIDQEGRCVITDHVHFVVFNVYGPRAVADDVERIEFKHRFYDILERRWE
CLLRQGRRVFVVGDLNIAPSAMDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHP
ERKDAFTCWSSSTGAEQFNYGSRIDHILVAGSCLHQDKDKQGHSFIACHVKECDILTEYK
RFKNENMSTRWKGGLGTKLKGSDHVPVFTSFDDMPDIPAHSTPPLSSRYLPMIYGFQQTL
VSVFMKRQANEEAKANEVTYSISSQGNASSSCGDISTGPLRTCGSKGISLENEPTCSVTE
SDIMASRGSIDNPTDGLCVSSVRAENISRDGNRKKARKIQSSQLSLKSFFTATSKANNGG
DNKSSSSSQGSQVDSITEPAVSSREDGESTTTSTQEEDQSGSSAKQKNGTALMEWQRIQN
LMQNSIPLCKGHKEACVARVVKKPGPTFGRRFYVCSRAEGPSSNPEANCGYFKWASSKFK
DK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgacttacaacgttaatggcttaaggcaacgagtttcccagtttgattct
cttctcaaacttctcgattccttcgacgctgatatcatctgcttccaggaaacgaaactt
agaagacaggaattaacagcagatttggctatagctgatgggtatgaatcgtttttctcg
tgtacacgcacttgtgagaaaggtcgtactggttactctggtgtagcaacgttttgcagg
gtaaagtcagcatctttaagctgtgaaattgctttgcctgttgcagcagaagaaggcatc
actggtcttgtaagtggtaattcacgattggggaagattgaaacgtctgtgatagctgaa
gggcttgaggaatatgagaaagatgagcttcttaggattgaccaagaaggacgctgtgtt
ataactgatcatgtccactttgttgttttcaatgtctatggaccgcgagctgtagctgat
gatgttgagaggattgagtttaagcatcggttctatgatattttagagagaagatgggag
tgtcttttgcgtcaaggaagaagggtatttgttgttggggatctcaacattgctccttct
gctatggatcgatgtgaagctgggcctgatttcgagaaaaacgagttcaggaagtggttt
agatctctgctagttgaacgtggaggctcattctcagatgttttcagatcaaaacatcca
gaaaggaaagatgcattcacatgttggtcctcgagtactggagcagaacaatttaactac
ggttcgaggattgatcatatcttagttgctggttcatgcttgcatcaagacaaagataag
caaggccatagttttattgcttgccatgtcaaggaatgtgacatattgacagagtataag
cggtttaagaatgaaaatatgtcaacaaggtggaaaggtggattgggtacaaaattaaag
ggatcagaccatgtacctgtattcactagttttgatgatatgccagacatcccggcacac
agcacgccgccattatcttcgagataccttcctatgatttatggtttccagcagactctt
gtttcagtgtttatgaaaaggcaagccaatgaggaagccaaagctaatgaagtgacatat
tcaatctcgagtcaaggtaatgcttcatcaagctgtggagatatttcgacaggaccactg
agaacctgtggttcaaaagggatttcactggagaacgaacccacttgtagcgttacagaa
tcagacattatggcatcaagaggttccatcgataaccctactgatggactctgtgtatca
tcagtgagagctgagaatatctctagagatggaaacaggaaaaaagcgaggaaaatccaa
tcatctcagctttctctcaaatcctttttcactgcaacctcaaaggcgaacaatggcggg
gataataagtcttcatcctccagtcagggctcccaagtggatagcatcacagaaccggca
gtttccagcagagaagacggtgaatcgacgactacttcaacacaagaagaagatcaaagc
ggttcttcagctaaacaaaagaacggtacagctctaatggagtggcaaaggatacagaac
ctaatgcaaaacagcatacctctctgcaaaggacataaagaagcttgtgttgctcgggtc
gtaaagaaaccaggtcccacatttggccgtagattctacgtctgctctcgagctgaggga
ccttcctctaatccagaagcaaactgtggttatttcaaatgggcttcatcaaaattcaaa
gacaagtaa
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