Camelina sativa (false flax): 104731497
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Entry
104731497 CDS
T05044
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104731497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104731497
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
104731497
Prokaryotic type
Archaeal type
TFE
104731497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn-ribbon_8
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
104731497
NCBI-ProteinID:
XP_019089358
LinkDB
All DBs
Position
12:complement(12774101..12777480)
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AA seq
474 aa
AA seq
DB search
MDKSVTVVHKTVVLEPFMRLVRIAARVFYLDNPTETDNNNQQKSAKGGSRCTATMMLDVL
TRRQWVREEDLAKELKQNAKELRKLIRFFEEQKFIVRYHRKETAKRAKMYSFAVAATTDG
RAEDNVKFHTHSYCCLDYAQIYDTVRYKLHRMKKQFKDELEDKNTVQEYCCPNCKRKYNA
LDALRLISMEDDTFRCENCNGELVMECNKLSSEEVVDRGDNARRRRREKIKVWLQNMEVE
MKPLVDQINKVKNLPFPGFEPFPAWEARAAKAARENGVLDPNDPSRSQGGYGSTPMPFLG
ETKVEVNLGEEKEDVKSKGGDSSLKVLPPWMIKKGMKLTEEQRGETRQGAEVDGEAAKLS
DDKKTVLGNGDGDKDVKDEYVKAYYAALLKQQEELAENLNPQEPAGESTTDIQLAATSPD
RQVGMKSKRGEEEEEEDVEWEEEAPVAANGNDKVDLNVEAEDEEEEDDIDWEEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggataaatcagtcacggtggtgcataagaccgttgtgctcgagccatttatgaggctg
gtgaggattgcagcaagggtattctatttagataatcctacggagactgataataataat
cagcagaaatctgctaaaggtggcagtagatgcactgccactatgatgctggacgtgctt
acgaggcggcaatgggtaagagaagaagacttggcaaaagagttgaagcagaatgccaag
gaacttcgtaaattaattagattttttgaagaacaaaaatttatcgttcgttaccacagg
aaagagactgcaaagcgtgcgaagatgtatagttttgcagtggctgctacaactgatggc
cgagcagaggacaacgttaagttccacacacactcatattgctgtcttgattatgcacag
atatatgatactgttcgttataaactgcaccggatgaagaaacagttcaaagatgaacta
gaagataagaatactgttcaggagtattgctgtcctaactgcaaaaggaaatataatgca
ctggatgccctgagattaatctctatggaagacgatacttttcgttgtgaaaattgcaat
ggtgaacttgttatggaatgtaacaagctatcttccgaagaagtagtagatagaggtgac
aatgcaaggagacggcggcgggaaaaaataaaagtttggcttcagaatatggaggttgaa
atgaaacctctggtggatcaaataaataaagtaaaaaacctaccgtttcctggctttgaa
ccttttccggcatgggaggctcgtgcagctaaggctgctcgtgaaaatggtgttcttgat
cctaatgatccttcgaggtcacagggtgggtatggttcaacaccaatgccatttctcgga
gagacaaaggttgaggttaaccttggtgaagaaaaagaagatgtcaaatctaaaggtgga
gattctagtctgaaagtcttacctccatggatgatcaagaaaggcatgaagctgaccgag
gaacaaagaggagagacgagacagggagcagaggttgatggagaagcagcaaagctttca
gatgacaagaaaacagtcttgggaaatggcgatggtgataaggatgtgaaggatgagtat
gtgaaagcttactacgccgctttactgaagcagcaagaagagcttgctgaaaacctgaat
ccgcaagaacccgcaggtgagtcaaccactgacatccaattggctgctacgtctccagat
cgtcaggttggtatgaaatccaaacgtggagaggaggaagaagaagaagatgttgaatgg
gaagaagaagctcctgtggcagccaatggaaacgacaaggtggatttgaatgtggaagca
gaagatgaagaagaagaagacgatattgattgggaagaaggctga
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