Camelina sativa (false flax): 104732196
Help
Entry
104732196 CDS
T05044
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104732196
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104732196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104732196
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104732196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
104732196
NCBI-ProteinID:
XP_010450036
LinkDB
All DBs
Position
2:complement(21929652..21932711)
Genome browser
AA seq
705 aa
AA seq
DB search
MDEGDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSVKKSDEAG
SRNDEDKAKVGIDGEDRVEPGLGTPEAEVSIPGLVGESVVKEGEGEAGGGSGGTDVVVAS
SGYGAQEVKVSDVSQEIPDGIGAGTGGGLRVELGPAATRATDLEVPRGNNIAQGLLPPPP
HVLGNNENLMRPVMGHVNGGTLPGPGISMVGNGGNIAMPGVIGGGTGGGGNGTFLFVGDL
HWWTTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFFDPMAATACKDGLNGYAFN
GRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPVVANNNAAIGGNF
QGGENRGFGRGNWGRGNAPGGRGPGGPMRNRPNGMGRGLMGNGAFGQGMGTGPPMNMMHQ
PMMGQGFEQAFGGPMARMGGYGGFPGAPGPPFPGLLSSFPPVGGVGLPGVAPHVNPAFFG
RGMPMNGMGMMLNAGVDGGHNMGMWDPNSGGWASGEDLGGGRAAESSYGEEAASDHQYGE
VNHDRGRPNPVKDKERASEREWSGSSDRRIREDKDAGYERDIPREKDVGHGYEMPERRHR
DDRDTGREREREHHHKDRERSKDRERERERDRERDRERDRHREGSSQRYGGDHRTRHRDE
PEHDDEWNRGRSSRGHSKSRLSREDNHRSRSRDADYGKRRRLTTE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggagatgggagagatcagatggatcaattccatcaaaacgaggcgatatct
gccgtagctgacgacgggtttatggcggaggaagaggatgatgattatgaggatctttac
aacgacgttaatgttggagaagggtttcttcagtctgtgaaaaagagcgacgaagcggga
tctagaaacgacgaggataaggcgaaggttggtatcgatggggaagatagggttgaaccg
ggtttgggtacgcccgaagctgaggtttcgataccgggtttggttggtgagagcgttgtt
aaagaaggagaaggagaagcaggaggaggaagtggtggtactgatgtggtagtcgcttct
agtggatatggagctcaagaggttaaggtaagcgatgttagccaggagattcctgatgga
attggtgctggtactggaggagggcttagagttgagttagggccagctgctactcgggca
actgatcttgaggttcctagaggaaataacattgctcagggtctcttgccgccaccacca
catgtgttaggaaataacgagaatttgatgagacctgtgatgggtcatgttaatggtggg
actcttcctggacctggtattagcatggttgggaacggaggtaatatagctatgcctggt
gttattggcgggggaactggtggaggaggcaatgggacttttcttttcgttggggatttg
cattggtggacaactgatgctgagcttgaggcagagttgtgcaagtatggtgctgtgaag
gaggttaagttctttgatgagaaagctagtgggaagtcgaaagggtattgtcaagtagag
ttctttgatcctatggcagctacagcttgcaaagacgggttgaacggttatgcattcaac
ggcaggccttgtgttgttgagtatgcgtctccgtattctgttaagagaatgggagaggca
caggtgaataggacccaacaggcacaatctgtaattgcacaagctaagagaggagggcct
gctgatcctccgagtaaacctgtcgttgccaacaacaacgccgctattggcgggaatttc
caaggtggggaaaatagaggatttggtagaggtaattggggtagaggcaatgctccgggt
ggtagaggacctggtggtccaatgaggaataggcctaacgggatgggaagaggtttgatg
ggtaatggtgcttttggtcagggcatgggtacagggcctcctatgaatatgatgcatcaa
ccaatgatggggcaagggtttgaacaagcttttggtggacctatggccagaatgggaggc
tatggaggattccctggggctccaggtccaccgtttcctgggcttttatcttctttccct
cctgtaggaggagttggtttacctggagtggcacctcatgtgaatccagcgttttttgga
cgagggatgccgatgaatggaatgggaatgatgcttaatgctggtgttgatggagggcat
aatatgggaatgtgggatcctaatagtggaggatgggctagtggtgaagatttgggtggt
ggaagagctgcggaatcgagttatggagaggaagctgcatctgatcatcagtatggagag
gttaatcacgatagaggtcgtccaaatcctgtgaaagataaagaaagagcttcagaaagg
gaatggtctggttcatctgatagaaggattcgtgaggataaagatgctggttatgaaagg
gacataccaagggagaaagatgttggtcatggttatgagatgccagagagaaggcaccgt
gatgatagagacactggtcgtgagcgtgagagggaacatcatcataaggatcgtgaacgc
tccaaagatcgtgagcgagaacgtgaacgtgacagagaaagggacagggagagggatcgt
catagagagggatcgtcacaacgatacggtggtgatcatcgtactagacacagggacgaa
cctgaacatgatgatgagtggaacagaggtcggtcatccagaggacacagcaaatcacgg
ttgtctcgggaggataaccatcgctcaagatcaagggatgctgattatgggaaaagaagg
cggcttactactgaataa
DBGET
integrated database retrieval system
