Camelina sativa (false flax): 104736937
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Entry
104736937 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104736937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104736937
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104736937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Megourin
Motif
Other DBs
NCBI-GeneID:
104736937
NCBI-ProteinID:
XP_010455326
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Position
13:complement(16814937..16820719)
Genome browser
AA seq
738 aa
AA seq
DB search
MIDDGSSLTVEMEVEDSPAAAIAPREPPKIQRLEESVINRIAAGEVIQRPVSAVKELVEN
SLDADSSSISVVVMDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLTKYEDLFSLSSMG
FRGEALASMTYVAHVTVTSITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYN
MIARRKTLQNSADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVVSPSRLDSIRS
VYGVSVAKNLMKVEVSSCDPSGCTFDMEGFISNSNYVAKKTILVLFINDRLVECSALKRA
IEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVELKLR
SANDTRTFQEQKVEYIQSTLTSSRSDPPVSPLLSGQKTQKVPVNKMVRTDSSDPAGRLHA
FLQPKSHNLPDKVSSLSVVRSSVRQRRNPKETADLSSVQELIAGVDSCCHPGLLETVRNC
TYVGMADDVFALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSELILL
ALKEEDLDLGNENNDDLKERIAEMNTDLLKEKTEMLDEYFSINIDSNGNLSRLPVILDQY
TPDMDRVPEFLLCLGNDVEWEDEKTCFQGVSAAIGNFYAMHPPLLPNPSGDGIQFYTKRS
ESSQDNTDLGGNVEMEENIDQDLLSDAENAWAQREWSIQHVLFPSMRLFLKPPAAMASNG
TFVKVASLEKLYKIFERC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacggttcgtctcttacggtggagatggaggtggaagattctccggcggcg
gcgattgcaccgagagaaccaccgaagattcaacgcctagaagagtcagtaatcaaccgt
atcgcagctggtgaagtaatccagcgtcctgtttcagcggtgaaggagctcgttgagaac
agcctcgacgccgattcaagttccataagcgtcgttgttatggacggtggcttgaaactc
attcaagtctcagacgacggtcacggtattagacgtgaagatttgccgatactatgcgag
agacatacgacatcgaagctaactaagtatgaggatttgttctcactcagctcaatggga
tttagaggagaggcattggctagtatgacttatgttgctcatgttacagtaacttcaatt
actaaaggccagattcatggttacagagtgtcgtatagagatggtgtcatggagcatgaa
ccaaaggcctgtgctgctgtcaaaggaactcagataatggtggagaatttgttctacaat
atgattgctagacggaagacacttcaaaattctgctgatgattatgggaaaatagtagac
ttgctgagtcgtatggccattcatcacaataatgtcagcttttcttgtcgaaagcatgga
gctgtcaaggcggatgttcactcagttgtgtcgccttcaaggcttgattcaattaggtct
gtttatggggtatcagttgcaaagaacttgatgaaagtagaagtatcctcttgtgacccc
tctggttgtacttttgatatggaaggtttcatatccaattcaaactatgttgctaagaag
accatattggtgcttttcattaatgatagattggtggaatgctctgccttaaaaagagcc
attgaaattgtttatgctgcaacattgccaaaagcatcgaaaccttttgtctacatgtca
atcaatttgccacgggaacatgttgatatcaatattcatccaacaaagaaagaggttagc
cttcttaaccaggaaatcattatcgagatgattcagtcagaggttgaattaaaactgaga
agtgcaaatgatactaggacttttcaagagcagaaagtggaatacattcaatctacatta
acatcctcgagaagtgatcctccagtttctccgttgctttctggacaaaaaacacagaaa
gttcctgttaataaaatggtgagaacggattcatcagatccagctggacggttacatgct
tttttgcaaccaaaatctcataacctccctgacaaggtttctagtttgagtgtagtaagg
tcttctgtaaggcaaagaagaaacccaaaggaaactgcggatctttctagtgtccaggaa
ctcattgctggagttgacagctgctgccatccaggtctgctggagactgttaggaattgc
acatatgttggaatggcagatgatgtttttgctttagttcagtataacacccatctatat
ctagcaaatgtggtgaacctcagcaaagagctcatgtatcagcaaactcttcgtcgtttt
gctcattttaatgctatacagcttagcgatccagcccctttgtcggagttaatattgttg
gctctgaaagaggaggatctagatctaggaaatgagaacaatgacgatctgaaagaaaga
atcgctgaaatgaatacagatcttctgaaggaaaaaacggaaatgttagatgagtatttc
agcattaacattgactccaatggaaatttgtcaaggcttcctgtcatactcgaccagtat
acacctgacatggaccgcgttcccgaatttttactatgcttgggaaatgatgttgagtgg
gaagatgagaagacttgctttcaaggagtttctgcagctattgggaacttttacgcgatg
catcctcctcttttgccaaacccatcgggtgacggtattcagttctatactaagagaagt
gagagctctcaagataatacagatttagggggtaacgttgagatggaagaaaatattgat
caagaccttctttcagatgctgaaaacgcatgggcacaacgtgaatggtctatccaacac
gtgttgtttccgtctatgagattgttcttgaagccaccagccgccatggcttcaaatgga
acttttgtcaaggtagcatcccttgaaaagctgtacaagatattcgaacgatgctaa
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