KEGG   Camelina sativa (false flax): 104754555
Entry
104754555         CDS       T05044                                 
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1 isoform X1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03022  Basal transcription factors
csat03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104754555
  09124 Replication and repair
   03420 Nucleotide excision repair
    104754555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104754555
   03400 DNA repair and recombination proteins [BR:csat03400]
    104754555
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     104754555
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     104754555
SSDB
Motif
Pfam: BSD F-actin_cap_A
Other DBs
NCBI-GeneID: 104754555
NCBI-ProteinID: XP_010475072
LinkDB
Position
17:complement(1541183..1546267)
AA seq 603 aa
MAGEQVEKRGVKYKSSIKDPGTPGFLRINEVMLLFVPNDPKSDSKLKLQTKNIKIVVIKK
FLQVINIPKKDLINLLGSISLPTRDGIISLSLKIIPTCILAVISSRPFLKVTRSLRKQLS
RHLPSNSVLKNWSYASSFLKKTGSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKS
KQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKD
FWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEAD
EGDDYSHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIV
AEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFES
QQGNVVNVPRGAKGLKRNVHEAYGLLKDSIVEIRATGLSDPLIKPEVSFEVFSSLTRTIS
TAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTPYLHTKVGKLKD
AMSNTYSKLDAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSDGERPN
GYV
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggctggtgagcaagtggagaagcgaggagtcaaatacaagagctctatcaaagatcca
ggaactcctggatttctcagaattaacgaagtaatgttgctcttcgtccctaacgatccc
aaatcagattcaaagctcaaactgcagactaaaaacatcaaaattgttgttatcaaaaaa
tttcttcaggtcataaatataccaaagaaggatctaataaacctccttggctctatctca
ctacctaccagggacggaatcatatcattgagtttgaaaattattccgacatgcatactt
gccgtgatttcgtcgcggcccttcttaaaagtgacgaggagcctaagaaagcagctgtca
cgacatctaccgagcaactcagtattaaagaattggagctacgcttcaagcttcttaaag
aaaacaggtagtgagctgcagagattgcataagcaatttgtggaaagtaaagtcctgacg
gaagatgaattctgggctacaaggaagaaattacttggtaaagattccatccgaaagtca
aagcagcagctcgggcttaagagcatgatggtttctggtatcaaaccatctactgatgga
cggactaatagagtgacgtttaacttgacacctgagatcatttttcagatttttgctgag
aagccggctgtacggcaggcattcataaattatgttccgagtaagatgacagaaaaagac
ttctggaccaaatattttagagcagaatatctttacagcaccaaaaatacagcagtagct
gcagcagaagctgctgaggacgaggaactcgctgtatttctgaagcctgatgagatcttg
gctcgggaaactcgtcaaaagattagacgggttgatccaactcttgacatggaggctgac
gagggagacgactacagtcatcttatggaccacgggatccagcgtgatggcaccatggat
gttgttgaaccacagaatgaccagtttaaacgatcacttttgcaagatcttaatcgtcat
gctgctgttgtattggaaggcagaagcattgatgttgattcagaagatacgaggattgtt
gcagaggctctcacacgggttaaacaagtaagcaaagctgatggggagaccaccaaggac
gctaatcaggagagattggaaagaatgtcccgggtagcaggaatggaggatcttcaagca
ccacaaaacttcccgttagccccgctttctatcaaggatcctcgtgattactttgaatct
caacaaggaaacgtcgtcaatgtacccagaggagcaaagggattaaagagaaatgtccat
gaagcttatggattactaaaagattccattgtggagattagagctacaggattaagtgat
ccgttgattaagcctgaagtttccttcgaggttttcagttcgttaacccgaactatctca
actgccaaaaatataattggaaagaacccacgagagagctttctagacagattaccaaag
tctactaaggatgaagttctacaccattggacatcaatacaagaattactaagacatttt
tggtcatcttatccgataacgaccccatatcttcataccaaggttggtaaactgaaggat
gcaatgtccaatacttattcaaaactcgatgcaatgaaagagtcagtgcaatctgatctc
cggcatcagatttctttactggttcgtccaatgcaacaggctcttgatgctgcgttccaa
cactacgaagcagatctgcagagaagaacagctaagagcagcgacggcgaaagaccaaat
gggtacgtatag

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