Camelina sativa (false flax): 104754555
Help
Entry
104754555 CDS
T05044
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104754555
09124 Replication and repair
03420 Nucleotide excision repair
104754555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104754555
03400 DNA repair and recombination proteins [BR:
csat03400
]
104754555
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104754555
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104754555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
F-actin_cap_A
Motif
Other DBs
NCBI-GeneID:
104754555
NCBI-ProteinID:
XP_010475072
LinkDB
All DBs
Position
17:complement(1541183..1546267)
Genome browser
AA seq
603 aa
AA seq
DB search
MAGEQVEKRGVKYKSSIKDPGTPGFLRINEVMLLFVPNDPKSDSKLKLQTKNIKIVVIKK
FLQVINIPKKDLINLLGSISLPTRDGIISLSLKIIPTCILAVISSRPFLKVTRSLRKQLS
RHLPSNSVLKNWSYASSFLKKTGSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKS
KQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKD
FWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEAD
EGDDYSHLMDHGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIV
AEALTRVKQVSKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFES
QQGNVVNVPRGAKGLKRNVHEAYGLLKDSIVEIRATGLSDPLIKPEVSFEVFSSLTRTIS
TAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHFWSSYPITTPYLHTKVGKLKD
AMSNTYSKLDAMKESVQSDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSDGERPN
GYV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgagcaagtggagaagcgaggagtcaaatacaagagctctatcaaagatcca
ggaactcctggatttctcagaattaacgaagtaatgttgctcttcgtccctaacgatccc
aaatcagattcaaagctcaaactgcagactaaaaacatcaaaattgttgttatcaaaaaa
tttcttcaggtcataaatataccaaagaaggatctaataaacctccttggctctatctca
ctacctaccagggacggaatcatatcattgagtttgaaaattattccgacatgcatactt
gccgtgatttcgtcgcggcccttcttaaaagtgacgaggagcctaagaaagcagctgtca
cgacatctaccgagcaactcagtattaaagaattggagctacgcttcaagcttcttaaag
aaaacaggtagtgagctgcagagattgcataagcaatttgtggaaagtaaagtcctgacg
gaagatgaattctgggctacaaggaagaaattacttggtaaagattccatccgaaagtca
aagcagcagctcgggcttaagagcatgatggtttctggtatcaaaccatctactgatgga
cggactaatagagtgacgtttaacttgacacctgagatcatttttcagatttttgctgag
aagccggctgtacggcaggcattcataaattatgttccgagtaagatgacagaaaaagac
ttctggaccaaatattttagagcagaatatctttacagcaccaaaaatacagcagtagct
gcagcagaagctgctgaggacgaggaactcgctgtatttctgaagcctgatgagatcttg
gctcgggaaactcgtcaaaagattagacgggttgatccaactcttgacatggaggctgac
gagggagacgactacagtcatcttatggaccacgggatccagcgtgatggcaccatggat
gttgttgaaccacagaatgaccagtttaaacgatcacttttgcaagatcttaatcgtcat
gctgctgttgtattggaaggcagaagcattgatgttgattcagaagatacgaggattgtt
gcagaggctctcacacgggttaaacaagtaagcaaagctgatggggagaccaccaaggac
gctaatcaggagagattggaaagaatgtcccgggtagcaggaatggaggatcttcaagca
ccacaaaacttcccgttagccccgctttctatcaaggatcctcgtgattactttgaatct
caacaaggaaacgtcgtcaatgtacccagaggagcaaagggattaaagagaaatgtccat
gaagcttatggattactaaaagattccattgtggagattagagctacaggattaagtgat
ccgttgattaagcctgaagtttccttcgaggttttcagttcgttaacccgaactatctca
actgccaaaaatataattggaaagaacccacgagagagctttctagacagattaccaaag
tctactaaggatgaagttctacaccattggacatcaatacaagaattactaagacatttt
tggtcatcttatccgataacgaccccatatcttcataccaaggttggtaaactgaaggat
gcaatgtccaatacttattcaaaactcgatgcaatgaaagagtcagtgcaatctgatctc
cggcatcagatttctttactggttcgtccaatgcaacaggctcttgatgctgcgttccaa
cactacgaagcagatctgcagagaagaacagctaagagcagcgacggcgaaagaccaaat
gggtacgtatag
DBGET
integrated database retrieval system