Camelina sativa (false flax): 104756500
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Entry
104756500 CDS
T05044
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104756500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104756500
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
104756500
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Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
104756500
NCBI-ProteinID:
XP_010477405
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Position
17:10071340..10073874
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AA seq
362 aa
AA seq
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MVMVGEEASSMEVDQCFLKMKMEGVSIKEWKDIPVELLMRILSLVDDRNVIVASGVCSGW
RDAISLGLTRLCLSWCNKNMNSLVLSLAPKIAKLQTLILRQDKPQLEDNAVEAIANHCHE
LQELDLSKSLRLTDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCG
CVNAVSDSALEAIGNNCNQMQSLNLGWCENISDEGVMSLAYGCPDLRTLDLCGCVLITDE
SVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLSSLN
ISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAHNPVPHP
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggttggagaagaagcatcatccatggaagttgaccagtgttttcttaagatg
aagatggaaggggtttcgatcaaagagtggaaagacatccctgtggagcttctgatgagg
atcctttctcttgttgatgatcgaaatgtcattgttgcttctggtgtttgctctggctgg
agagatgctatctctcttggcctcactcgcctctgtctctcttggtgcaacaaaaacatg
aacagcttggttctttctcttgctcccaagatcgcaaagctgcagactttaatactgcgg
caggacaaaccacagctagaggacaatgcagtggaggccatagcaaatcactgccatgag
ctacaagagcttgatctcagcaaaagtttgagacttactgatcgttccctctatgcactt
gctcatggttgccctgacctcacgaaactcaaccttagcggctgtacttcattcagcgac
actgctattgcgtatctgaccagattctgtagaaagcttaaagttttgaatctctgcgga
tgtgtcaatgctgtatctgatagtgccttggaggctattgggaataactgcaatcagatg
cagtcactaaatttgggatggtgtgagaatatcagtgatgaaggggtaatgagtttagct
tatggctgcccagatctcaggactcttgacctctgtggctgtgttctaattacagatgag
agtgtggtagctctagcagactggtgtgtccacttgaggtcactggggttatactactgc
agaaacataacagacagggcgatgtactcactagctcaaagcggggtaaagaacaaacca
ggttcatggaaatcggttaagaaaggcaaatacgatgaagaaggactgagcagtctcaac
attagccaatgcactgcccttacaccttcagcggttcaagctgtttgcgatacctttcct
gctcttcacacatgttctggaaggcattcacttgtcatgagcggttgtctgaacttgaca
tccgtgcactgtgcttgtatccttcaggctcatcgcgcacacaacccagttcctcatccg
gctcactaa
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