Camelina sativa (false flax): 104762349
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Entry
104762349 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104762349
03036 Chromosome and associated proteins [BR:
csat03036
]
104762349
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104762349
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104762349
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104762349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
104762349
NCBI-ProteinID:
XP_010483921
LinkDB
All DBs
Position
18:18035848..18039550
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AA seq
681 aa
AA seq
DB search
MPSLMLSDKKEEKKMKKKIALETPELDSKKGKKEAKLKFSSSDEEDSEKKKSKRKEKKRK
AAEDDEEEGKSDSSSEKKKKKKSSKKVKLGIEDVEVDNPNAVSKFRISAPLREMLKKNGI
EALFPIQATTFDMVLDGADLVGRARTGQGKTLAFVLPILESLINGPAKSKKKNGYGRPPS
VLVLLPTRELAKQVNADFETYGLALGLTSCCVYGGEGYSAQQNSLRKGVDIVVGTPGRVK
DFINNEKIDLSYLQFRVLDEADEMLRMGFVEDVEFILGKVEDATKVQTLLFSATLPQWVQ
NISLKFLKKDLKTIDLVGNDKMKASNSVRHIAIPCNKAAMPRLIPDIISCYSSGGQTIIF
AEKKEEANELSGLLAGSRTLHGDIQQSQREVTLAGFRKGKFSTLVATNVAARGLDINDVQ
LIIQCEPPREVESYIHRSGRTGRAGNTGVAVTLYESRKSSISRIEREAGIKFEYLSAPQP
NDIARAGGMDAAEKIKQVCDSVVPAFLEAAKKLLENSGLSAEVLLAKALAKTAGFTEIKK
RSLLTSMENHVTLHLEAGRPIQSPSYVYGMLRRVLPEDKVERIEGLSLTADKSGAVFDIV
QSDLDLFLAAGQKNPGSMSLEVVKEMPKLQEREPLPQRRFGRGGSRFGNGGGRFGSGGGG
SRFGGGGGRGGRGGGRGGGRW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactaatgttatccgacaagaaagaggagaagaagatgaagaagaagatagcc
ttggaaaccccagagcttgactctaagaaggggaagaaggaggcgaagctgaagttttcc
tcttcggatgaagaagactcggagaagaagaagagtaagaggaaggagaagaagcgtaag
gctgcggaggatgatgaggaagaagggaagagcgattcgagctctgagaagaagaagaag
aagaagagcagcaagaaggttaagttgggtattgaagatgttgaagttgataaccctaac
gctgtttccaagtttaggatctcggctccgttgagggagatgcttaagaagaatggtatt
gaagctcttttccctattcaagctacaacgtttgatatggttctcgatggtgctgattta
gttggacgggctcgtactggtcagggtaaaacactggcctttgtgttgcctatattggaa
tcattgatcaatggacctgcgaagagcaaaaagaagaatgggtatggcaggccaccaagt
gttttggtccttttacccaccagagaattggccaagcaggtgaatgctgactttgaaaca
tacggattagcacttgggttaacttcttgctgtgtctatggaggtgaaggttattctgcc
cagcagaatagtttaaggaaaggtgttgacattgtggttggaacccctggtcgtgttaag
gattttattaataacgaaaaaattgatctgagctatctacaattccgtgtgcttgatgaa
gctgatgaaatgttgaggatggggtttgttgaggatgttgaatttatattagggaaagtg
gaagatgctactaaagtccagactcttctcttcagtgctactctgccacaatgggttcaa
aatatctctctcaagtttcttaaaaaagacctgaagactattgatcttgttggtaatgat
aaaatgaaggccagtaatagtgtacgacacattgctattccctgtaataaggcagccatg
cctcggttgattcctgatattatcagttgctatagcagtggaggccaaaccattattttc
gctgagaaaaaagaggaagcgaacgagctttctggtttgttggctgggtcaagaactttg
catggagacatacagcaatcacaacgcgaggttactcttgctggatttaggaagggcaag
ttttcgacattggtggctactaacgttgctgctcgtggtctagatatcaatgatgtgcag
ttaattatacagtgtgagcctccacgtgaggttgaatcatatattcatcgttcaggccga
acaggaagagctggcaacactggagttgcagttacactttacgaatctagaaagtcaagt
atatccagaatcgaaagagaagcaggtataaaatttgagtacttgtctgcacctcagcct
aatgatattgccagagctggtggtatggatgctgctgagaaaattaaacaagtttgcgac
agtgtggttcctgcattcttggaagctgcgaagaaattattagaaaattctggtttatca
gctgaagtactcctcgcaaaagctcttgcaaaaacagcgggcttcactgagattaagaaa
aggtcacttcttacatcaatggagaaccatgtaacactacatcttgaagcaggaagacca
atacagtcgccgtcatatgtttatggaatgctaagaagagttttaccagaagacaaggtg
gagcgtattgaagggttgagtctaacagcggataaaagcggagcagtgtttgacattgtg
caatcggatctagacttattccttgcagctgggcaaaagaatcctggaagtatgagcttg
gaagtggttaaggagatgcctaaacttcaggagagagaaccattgccacaaagaagattt
ggtcgcggcggtagccggttcggcaatggtggtggaaggttcggcagtggtggcggtgga
agccggttcggcggtggtggcggcagaggaggaagaggtggcggcagaggaggaggtagg
tggtag
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