Camelina sativa (false flax): 104782633
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Entry
104782633 CDS
T05044
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104782633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104782633
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104782633
DNA repair and recombination proteins [BR:
csat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104782633
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
SAP_new25
Motif
Other DBs
NCBI-GeneID:
104782633
NCBI-ProteinID:
XP_010505926
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Position
4:26639384..26642419
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AA seq
547 aa
AA seq
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MNKVLQLGFQSSVVNFAKFLVVPLRSLRVGSSIVGVRVGTVSFNKRLMSNATAVKSIPFS
INNNNSNRKDLKIVAAVTDQMGSDSDRDDMGTLQGDKKEIEAMTVQELRATLRKLGLPVK
GRKQELISTLRLHMDSNLPGEISGSEQKETTTSTRSASVTIKRKIRNREEPAEDDRINSE
AYGIENGEKRVKQSTEKILKAKVSSKAISKERQSLTKTGKQQFQSKEEASSTLSSEVLKT
EEIISSPSQSEPWTVLAHKKPQKDWKAYNPKTMSPPSLPEGTKHVKVMTWNVNGLRALLK
LESFSALQLAQRENFDVLCLQETKLQMKDVEDIKKTLIDGYDHSFWSCSISKLGYSGTAI
ISRIKPLSVRYGTDLSGSDHDMEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDR
TLSNYIKELEKSKPVILTGDLNCAHEEIDIFNPAGNIRSAGFTIEERQSFGANFLDKGLV
DTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSDSIAANVHDSYILPDINGSDHCP
IGLTLKL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggttcttcagttaggtttccagagctccgtcgtcaatttcgccaagtttctg
gtggtgcctcttaggagtttaagagttggttcttctatcgttggtgttagagtaggaaca
gtaagtttcaacaagaggcttatgtcaaatgctactgcggttaaatctatacctttttct
atcaacaacaacaacagcaacagaaaggacctcaagatagttgcagcagttactgatcag
atgggaagtgatagtgatagagatgatatgggaactcttcaaggtgataaaaaggaaatt
gaggcgatgacagttcaagaacttagagccacattgaggaaacttggcctacctgtgaaa
gggcgcaaacaagaacttatctcaacgttacgacttcacatggacagcaatttaccggga
gaaatttctggttcagaacaaaaggaaactactacttctactcgttcagcaagtgtcacg
atcaaaagaaagatcagaaacagggaagagcctgctgaagatgaccgcattaactctgaa
gcttatggcattgaaaacggagagaagagagtaaaacagtctactgagaaaattttgaaa
gctaaagtttcttcgaaagccatctccaaagaacgccaatcattgacgaaaacaggtaag
cagcaatttcagtcaaaagaagaagcctcatcaactctctctagtgaagttctgaaaacc
gaagaaattatatcatccccgagtcagagtgaaccgtggactgtacttgctcataagaag
cctcagaaggactggaaagcttataacccaaagacaatgagccctccctctctaccagag
ggaaccaagcatgtgaaggttatgacttggaatgttaatggattgagagcattgttgaaa
ttagagagcttctctgctctgcagcttgcccaaagagaaaactttgatgtcttgtgcttg
caggagactaaactccagatgaaggatgttgaggatattaagaaaactcttattgatggc
tatgatcatagtttttggtcctgtagcatctcaaaacttggttactctggaactgcaata
atctcacggataaaaccactctcagttagatatggtaccgatctatctggatcagatcat
gacatggaaggacgcattgtgactgctgaatttgactccttctacttaattaatacttat
gtccctaattccggagatggcttaaaaagactgtcatacaggatcgaagaatgggatcga
accctcagcaattacatcaaagagctggagaagtctaagcctgtgatcttgacgggtgat
ctaaattgtgctcatgaggaaatagacatcttcaatcccgcggggaacataagaagtgct
ggttttacaatagaagaaaggcaatcctttggtgcaaacttcttagacaagggcttggta
gatacctttagaaagcaacatcctggagtagttggttacacgtattggggttatcgccat
ggtggccgtaaaacaaacaaaggatggagactggactacttcttggtgtcggattcgatc
gcagcaaatgtccatgattcttacatcctccctgatattaatgggagtgatcattgcccc
ataggcctaactctcaagctctga
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