Camelina sativa (false flax): 104784762
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Entry
104784762 CDS
T05044
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104784762
03015 mRNA surveillance pathway
104784762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104784762
03036 Chromosome and associated proteins [BR:
csat03036
]
104784762
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104784762
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104784762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
DUF4678
Motif
Other DBs
NCBI-GeneID:
104784762
NCBI-ProteinID:
XP_010508133
LinkDB
All DBs
Position
5:1254636..1256238
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AA seq
151 aa
AA seq
DB search
MAETARRQGGGRPLPPPPRGVNQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTQEDYAVR
GKEPKDEVQIYTWKDATLRELTDLVKEVSVAARRRNARLSFAFVYPDSHGRFIVKEVGQT
MSYPNRKQPDDSKTLSELRFEIGDYLDVAIY
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacagcgagaagacaaggtggagggagaccattgccgccacctccgagaggc
gttaaccaacctcctcgccctaaacctgaacctgtcgatcgtgaaaagacatgtcccctg
cttcttcgtgttttcaccaagagtggtggtcatcatactcaggaagattatgctgtgaga
ggcaaagaaccaaaggatgaagttcaaatctacacttggaaagatgccactcttcgtgag
ttaactgatttggtgaaagaagtatctgtagcagctaggagaaggaatgcaagattgtct
tttgcgtttgtttatcctgactcgcatggtcgctttattgtcaaagaggttgggcagaca
atgtcttatccaaaccgtaaacaaccagatgacagtaaaacgctttccgaacttaggttt
gagattggagattatctggatgtggcaatttactag
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