Camelina sativa (false flax): 104787316
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Entry
104787316 CDS
T05044
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104787316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104787316
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104787316
03036 Chromosome and associated proteins [BR:
csat03036
]
104787316
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104787316
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104787316
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104787316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
104787316
NCBI-ProteinID:
XP_010414886
LinkDB
All DBs
Position
7:complement(11861464..11864740)
Genome browser
AA seq
538 aa
AA seq
DB search
MESITLDIELLQLPETSPVSMKSNQDFVKKLFDQWLALPETNRLVTSLVNDAKAGVALNV
MCGGGSLGSNSGSNSPLASMFPARNGPPLSPRNSTGSPRITRQRTGLSNLNSPLKVVSDH
VKELIPQFYFEDGRPPPNDLKEQCIAKINSLFYGHEDGLQIQEFKLVTTEICKVPSFFST
SIFKKVDTNNTGFVKREAFIDYWVKGNMLTKEITNQIYTILKQPDHKYLVQDDFKPVLQE
LLATHPGLEFLQGTPEFQDRYAETVIYRIYYYINRSGNGHLTLRELKRGNLVDAMQHADE
EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYSNHALTYRIVDRIFSQVP
RKFTSKTEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGVLTRNELQFFYEEQL
HRMECMAQEAVLFEDILCQLFDMVKPEDEGYICLNDLKGSKLSGNVFNILFNLNKFMAFE
TRDPFLIRQERANPTWTEWDRFAHREYIRLSMEEDVEDASNGSAQAWDDSLEVPFEFL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagtctatcacgcttgatatagagctgttgcagttacctgagacatcaccagtgtcg
atgaaatctaatcaagattttgttaagaagctctttgatcaatggcttgcccttcctgaa
accaaccgcttggttacatctttggtaaatgatgcaaaggcaggagtggctttgaatgtt
atgtgtggaggaggctctttgggctcgaattcagggtctaatagtccattggcttcaatg
tttccggcacgtaacgggcctcctctttctccaaggaactcaactggttcgcctcggatc
actagacaaaggactggtctttctaatcttaactctcctctcaaagttgtttctgatcat
gtcaaagagctcattcctcagttttactttgaagatggtcgcccaccaccaaatgatctg
aaagagcagtgtatagctaagatcaacagtcttttttatggccatgaggatggtttgcaa
atccaagaatttaaattagtcactaccgagatctgcaaggttccatcatttttttccacc
tccattttcaagaaagttgataccaataacactggttttgtgaaaagagaagccttcatt
gattattgggttaagggaaatatgttgacaaaggagataacaaatcagatatatacaata
ctgaagcaaccggatcacaagtaccttgtccaggatgatttcaagcctgtgctccaagaa
ctattagcaacacaccctggtcttgaattcttacaaggcacacctgagtttcaagataga
tatgctgaaactgtaatatacagaatatattactacataaacagaagtgggaatgggcat
cttaccttgagagagcttaagcgaggaaatctagttgatgcaatgcagcatgccgatgaa
gaagaggacatcaataaggttttgaggtacttctcgtatgaacatttctatgtcatatac
tgcaagttctgggagctggatacagaccatgatttcttgatcgacaaagagaatctcatc
cgatatagtaaccatgcactcacctacagaattgtcgaccgaatcttctctcaggtaccg
aggaagtttactagtaaaaccgaaggaaaaatgggatatgaggattttgtttacttcata
ttggccgaagaagacaagtcatcagaacctagtcttgagtattggttcaagtgcatagat
ttggatgcaaatggagttttgacgcggaacgagctacaattcttttacgaggaacagctg
catagaatggagtgcatggcgcaagaggcggtgctgtttgaggatattttgtgccaatta
ttcgacatggtcaaaccagaggacgaagggtacatttgtctgaatgacttgaagggttct
aagctctctggaaatgtgttcaacatacttttcaacctcaacaagtttatggcgtttgaa
actcgcgatcccttcctcatccgccaggagcgggcaaatccaacatggacggagtgggat
cgttttgctcatagagaatatattaggctatcaatggaagaagatgtcgaagatgcttct
aatggaagtgctcaagcatgggacgactcacttgaggtcccttttgagtttctttaa
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